Pan paniscus (bonobo): 100981363
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Entry
100981363 CDS
T02283
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100981363 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100981363 (XAB2)
03041 Spliceosome [BR:
pps03041
]
100981363 (XAB2)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100981363 (XAB2)
Spliceosome [BR:
pps03041
]
Complex B
Other components
Prp19-related factors
100981363 (XAB2)
Complex C
100981363 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
100981363
NCBI-ProteinID:
XP_003810054
Ensembl:
ENSPPAG00000043224
UniProt:
A0A2R9CJL3
LinkDB
All DBs
Position
20:complement(12290424..12300593)
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AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPLRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactctcgcggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tacatcgagttcaaacagggcgccccgaagcccaggctcaatcagctatacgagcgggca
ctcaagctgctgccctgcagctacaaactctggtaccgatacctgaaggcgcgtcgggca
caggtgaagcatcgctgtgtgactgaccctgcctatgaagatgtcaacaactgtcatgag
agggcctttgtgttcatgcacaagatgcctcgtctgtggctagattactgccagttcctc
atggaccaggggcgcgtcacacacacccgccgcaccttcgaccgtgccctccgggcactg
cccatcacgcagcactctcgaatttggcccctgtatctgcgcttcctgcgctcacaccca
ctgcctgagacagctgtgcgaggctatcggcgcttcctcaagctgagtcctgagagtgca
gaggagtacattgagtacctcaagtcaagtgaccggctggatgaggccgcccagcgcctg
gccaccgtggtgaacgacgagcgtttcgtgtccaaggccggcaagtccaactaccagctg
tggcacgagctgtgcgacctcatctcccagaatccggacaaggtacagtccctcaatgtg
gatgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgt
tctctcgccgactactacatccgcagtggccatttcgagaaggctcgggacgtgtacgag
gaggccatccggacggtgatgaccgtgcgggacttcacacaggtgtttgacagctacgcc
cagttcgaggagagcatgatcgctgcaaagatggagaccgcctcagagctggggcgcgag
gaggaggatgatgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccgg
cggcccctgctcctcaacagcgtcttgctgcgccaaaacccacaccacgtgcacgagtgg
cacaagcgtgtcgccctgcaccagggccgcccccgggagatcatcaacacctacacagag
gctgtgcagacggtggaccccttcaaggccacaggcaagccccacactctgtgggtggcg
tttgccaagttttatgaggacaacgggcagctggacgatgcccgtgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggatgacctggcaagcgtgtggtgtcagtgcgga
gagctggagctccgacacgagaactacgatgaggccttgcggctgctgcgaaaggccacg
gccctgcctgcccgccgggccgaatactttgatggctcagagcccgtgcagaaccgcgtg
tacaagtcactgaaggtctggtccatgctcgctgacctggaggagagcctcggcaccttc
cagtccaccaaggccgtgtacgaccgcatcctggacctgcgtatcgcgacaccccagatc
gtcatcaactatgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgcggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaaattcattgcccgctatgggggccgcaagctggagcgggcacgggacctgttt
gaacaggctctggacggctgccccccaaaatatgccaagaccttgtacctgctgtacgca
cagctggaggaggagtggggcctggcccggcatgccatggccgtgtacgagcgcgccacc
agggccgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgggcggcc
gagatctatggggtcacccacacccgtggcatctaccagaaggccattgaggtgctgtcg
gacgagcacgcgcgtgagatgtgcctgcggtttgcagacatggagtgcaagctcggggag
attgaccgggcccgggccatctacagcttctgctcccagatctgtgacccccggacgacc
ggtgcgttctggcagacgtggaaggactttgaggtccggcatggcaatgaggacaccatc
aaggaaatgctgcgtatccggcgcagcgtgcaggccacgtacaacacgcaggtcaacttc
atggcctcgcagatgctcaaggtctcgggcagtgccacgggcaccgtgtctgacctggcc
cctgggcagagtggcatggacgacatgaagctgctggaacagcgggcagagcagctggcg
gctgaggcggagcgtgaccagcccttgcgtgcccagagcaagatcctgttcgtgaggagt
gacgcctcccgggaggagctggcagagctggcacagcaggtcaaccccgaggagatccag
ctgggcgaggatgaggacgaggacgagatggacctggagcccaacgaggttcggctggag
cagcagagcgtgcccgccgcagtgttcgggagcctgaaggaagactga
DBGET
integrated database retrieval system
