Pan paniscus (bonobo): 100983407
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Entry
100983407 CDS
T02283
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50 isoform X1
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pps04121
]
100983407 (TRIM50)
Ubiquitin system [BR:
pps04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100983407 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
TRIM_CC
Trimer_CC
zf-Nse
Prok-RING_4
U-box
zf-RING_6
Baculo_IE-1
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
100983407
NCBI-ProteinID:
XP_034807965
LinkDB
All DBs
Position
6:91573297..91592291
Genome browser
AA seq
487 aa
AA seq
DB search
MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV
DGSSSPPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH
PVTPVSTVYSRMKEELAALIAELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ
ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFSNEDHHEF
IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP
ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASCGFSCGRHYWEVVVGSKSD
WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY
EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS
PEQPTKL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcttggcaggtgagcctgccagagctggaggaccggcttcagtgtcccatctgcctg
gaggtcttcaaggaacccctgatgctacagtgcggccactcctactgcaagggctgcctg
gtttccctgtcctgccacctggatgccgagctgcgctgccccgtgtgccggcaggcggtg
gacggcagcagctccccgcccaacgtctccctggcccgggtgatcgaagccctgaggcta
cctggggacccggagcccaaggtctgcgtgcaccaccggaacccgctcagccttttctgc
gagaaggaccaggagctcatctgtggcctctgcggtctgctgggctcccaccaacaccac
ccggtcacgcccgtctccaccgtctacagccgcatgaaggaggagctcgcagccctcatc
gctgagctgaagcaggagcagaaaaaggtggatgagctcatcgccaaactggtgaacaac
cggacccgaatcgtcaatgagtcggatgtcttcagctgggtgatccgccgcgagttccag
gagctgcaccacctggtggacgaggagaaggcccgctgcctggaggggatagggggtcac
acccgtggcctggtggcctccctggacatgcagctggagcaggcccagggaacccgggag
cggctggcccaagccgagtgtgtgctggaacagttcagcaatgaggaccaccacgagttc
atccggaagttccactccatggcctccagagcagagatgccgcaggcccggcccttagaa
ggcgcattcagccccatctccttcaagccaggcctccaccaggctgacatcaagctgacc
gtgtggaaaaggctcttccggaaagttttgccagccccggagcctctcaagttggaccct
gccactgcccacccactcctggagctctccaagggcaacacggtggtgcagtgcgggctc
ctggcccagcggcgagccagccagcctgagcgctttgactacagcacctgcgtcctggcc
agctgcggcttctcctgcggccgccactactgggaggtggtggtgggcagcaagagcgac
tggcgcctgggggtcatcaagggcacagccagccgtaagggcaagctgaacaggtccccc
gagcacggcgtgtggctgatcggcctgaaggagggccgggtgtacgaagcctttgcctgc
ccccgggtacccctgcctgtggccggccacccccaccgcatcgggctctacctgcactat
gagcagggcgaactcaccttcttcgacgccgaccgccccgatgacctgcggccgctctac
accttccaggccgacttccagggcaagctctaccccatcctggacacctgctggcacgag
aggggcagcaactcgctgcccatggtgctgcccccgcccagcgggcctggccccctcagc
cccgagcagcccaccaagctgtag
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integrated database retrieval system
