Pan paniscus (bonobo): 100983653
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Entry
100983653 CDS
T02283
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pps
Pan paniscus (bonobo)
Pathway
pps04151
PI3K-Akt signaling pathway
pps04382
Cornified envelope formation
pps04510
Focal adhesion
pps04512
ECM-receptor interaction
pps04820
Cytoskeleton in muscle cells
pps04926
Relaxin signaling pathway
pps04933
AGE-RAGE signaling pathway in diabetic complications
pps04974
Protein digestion and absorption
pps05146
Amoebiasis
pps05165
Human papillomavirus infection
pps05200
Pathways in cancer
pps05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100983653 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100983653 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100983653 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100983653 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100983653 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
100983653 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
100983653 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100983653 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
100983653 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100983653 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
100983653 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100983653 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pps04147
]
100983653 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
pps00536
]
100983653 (COL4A6)
Exosome [BR:
pps04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100983653 (COL4A6)
Glycosaminoglycan binding proteins [BR:
pps00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100983653 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100983653
NCBI-ProteinID:
XP_003819736
Ensembl:
ENSPPAG00000001322
LinkDB
All DBs
Position
X:complement(107637519..107920788)
Genome browser
AA seq
1687 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIGIQGPT
GPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPP
GLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDG
ITGQQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGP
PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGIPGLPGPRGP
MGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDP
GVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAVG
LPGRDGLPGPPGPPGPPSPEFETETLHNKEPGFPGLRGEQGPKGNLGLKGIKGDSGFCAC
DGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGK
KGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLP
GLPGEKGHLGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCIIPGSYG
PSGFPGTPGFPGPKGSRGLPGTPGQPGSSGTKGEPGSPGLVHLPELPGFPGPRGEKGLPG
FPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGL
KGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGK
KGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGF
VGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSARAGTPGEKGDRGNPGPVGIPSPRRPMSN
LWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMG
IRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISSSPGPK
GQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLP
GSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPG
PKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRP
GLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGDQGIPGFSGLPGELGLK
GMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGPRGAPGQTPTAEAVQVPPGPLGL
PGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGF
EGAPGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCPIGMSQLWVGYSLLFVEGQEKA
HNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVSQTQIPQY
ISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSC
LEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQLHTRVSRC
QVCMKSL
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgaccgaggaactggcagga
gcgggagagaagtcttatggaaagccatgtgggggccaggactgcagtgggagctgtcag
tgttttcctgagaaaggagcgagaggacgacctggaccaattggaattcaaggcccaaca
ggtcctcaaggattcactggctctactggtttatcgggattgaaaggagaaaggggtttc
ccaggccttctgggaccttatggaccaaaaggagataagggtcccatgggagttcctggc
tttcttggcatcaatgggattccgggccaccctggacaaccaggccccagaggcccacct
ggtctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggctat
cctgggcttctcggaccacccgggcttcctggtcagaaaggatcaaaaggtgaccctgtc
cttgctccaggtagtttcaaaggaatgaagggggatcctgggctgcctggactggatgga
atcactggccaacaaggagcacccggatttcctggagctgtaggacctgcaggaccacca
ggattacaaggtcctccagggcctcctggtcctcttggtcctgatgggaatatggggcta
ggttttcaaggagagaaaggagtcaagggggatgttggcctccctggcccagcaggacct
ccaccatctactggagagctggaattcatgggattccccaaagggaagaaaggatccaag
ggtgaaccagggcctaagggttttccaggcataagtggccctccaggcttcccgggcctt
ggaactactggagaaaagggagaaaagggaatccctggtttgccaggacctaggggtccc
atgggttcagaaggagtccaaggccctccagggcaacagggcaagaaagggaccctggga
tttcctgggcttaatggattccaaggaattgagggtcaaaagggtgacattggcctgcca
ggcccagatgttttcatcgatatagatggtgctgtgatctcaggtaatcctggagatcct
ggtgtacctggcctcccaggccttaaaggagatgaaggcatccaaggcctacgtggccct
tctggtgtccctggattgccagcattatcaggtgtcccaggagccctagggcctcaggga
tttccagggctgaagggggaccaaggaaacccaggccgtaccacaattggagcagttggc
ctccctggcagagatggtttgccaggcccaccaggtccaccaggcccacctagtccagaa
tttgagactgaaactctacacaacaaagagccagggttccctggtctccgaggagaacaa
ggtccaaaaggaaacctaggcctcaaaggaataaaaggagactcaggtttctgtgcttgt
gacggtggtgttcccaacactggaccacccggggaaccaggcccacctggtccatggggt
ctcataggccttccaggccttaaaggagccagaggagatcgaggctctgggggtgcacag
ggcccagcaggggctccaggcttagttgggcctctgggtccttcaggacccaaaggaaag
aagggggaaccaattctcagtacaatccaaggaatgccaggagatcggggtgattctggc
tcccagggcttccgtggtgtaataggagaaccaggcaaagacggagtaccaggtttacca
ggtctgccaggccttccgggtgatggtggacagggcttcccaggtgaaaaggggttacct
ggacttcctggtgaaaaaggccatcttggtccacctggcctcccaggaaatgggttacca
ggacttcctggaccccgtgggcttcctggagataaaggcaaggatggattaccgggacaa
caaggccttcccggatctaagggaatcaccctgccctgtattattcctgggtcatacggt
ccatcaggatttccaggcactcccggattcccaggccctaaagggtctcgaggcctccct
gggaccccaggccagcctgggtcaagtggaactaaaggagagccagggagtccaggattg
gttcatcttcctgaattaccaggatttcctggacctcgtggggagaagggcttgcctggg
tttcctgggctccctggaaaagatggcttgcctgggatgattggcagtccaggcttacct
ggttccaagggagccactggtgacatctttggtgctgaaaatggtgctccgggggaacaa
ggcctacaaggattaacagggcacaaaggatttcttggagactctggccttccaggactc
aagggtgtgcacgggaagcctggcttactaggccccaaaggtgagcggggcagccctggg
acaccaggacaggtgggacagccaggcactccaggatctagtggtccatatggcatcaag
ggcaaatctgggctcccaggagcaccaggcttcccaggcatctcaggacatcctggaaag
aaaggaacaagaggcaagaaaggtcctcctggatcaattgtaaagaaagggctgccaggg
ctaaaaggccttcctggaaatccaggcctagtaggactgaaaggaagcccaggctctcca
ggggtcgctgggttgccagccctctctggacccaagggagagaaggggtctgttggattc
gtaggttttccaggaataccaggtctgcctggtattcctggaacaagaggattaaaggga
attccaggatcaactggaaaaatgggaccatctgcacgcgctggtactcctggtgaaaag
ggagacagaggcaatccggggccagtcggaatacctagtccaagacgtccaatgtcaaac
ctttggctcaaaggagacaaaggctctcaaggctcagccggatccaatggatttcctggg
ccaagaggtgacaaaggagaggctggtcgacctgggccaccaggcctacctggagctcct
ggcctcccaggcattatcaaaggagttagtggaaagccagggccccctggcttcatggga
atccggggcttacctggcctgaaggggtcctctgggatcacaggtttcccaggaatgcca
ggagaaagtggttcacaaggtatcagagggtcgcctggactcccaggagcatctggtctc
ccaggcctgaaaggagacaacggccagacagttgaaatttccagtagcccaggacccaag
ggacagcctggcgaatctggttttaaaggtacaaaaggaagagatggactaataggcaat
ataggcttccctggaaacaaaggtgaagatggaaaagttggtgtttccggagatgttggc
cttcctggagctccaggatttccaggagttgccggcatgagaggagaaccaggacttcca
ggttcttctggtcaccaaggggcaattgggcctctaggatcccccggattaataggaccc
aaaggcttccctggatttcctggtttacatggactgaatgggcttccgggcaccaagggt
acccatggcactccaggacctagtatcaccggtgtgcccgggcctgctggtctccctgga
cccaaaggagaaaaaggatatccaggaattggcatcggagctccagggaagccgggcctg
agagggcaaaaaggtgatcgaggtttcccaggtctccagggccctgctggtctccccggt
gccccaggcatctccttgccctcactcatagcaggacagcctggtgaccccgggcgacca
ggcctagatggagaacgaggccgcccaggccccgctggacccccaggtccccctgggcca
tcctcgaatcaaggcgacaccggagaccctggcttccctggaattcctggacctaaaggg
cctaagggagaccaaggaattccaggtttttctggcctccctggagagctaggactgaaa
ggcatgagaggtgagcctggcttcatggggactccaggcaaggttgggccacctggagac
ccaggatttcccggaatgaaggggaaggcagggccaagaggctcttctggcccccgaggt
gcacctggacaaacaccaactgcggaagctgtccaggttcctcctggacccttgggtcta
ccagggatcgatggcatccctggcctcactggggaccctggggctcaaggccctgtaggc
ctacaaggctccaaaggtttacctggcatccccggtaaagatggccccagtgggctccca
ggcccacctggggctcttggtgatcctggtctgcctggactgcaaggccctccaggattt
gaaggagctccagggcagcaaggccccttcgggatgcctggaatgcctggccagagcatg
agagtgggctacacgttggtaaagcacagccagtcggaacaggtgcccccgtgtcccatc
gggatgagccagctgtgggtggggtacagcttactgtttgtggaggggcaagagaaagcc
cacaaccaggacctgggctttgctggctcctgtctgccccgcttcagcaccatgcccttc
atctactgcaacatcaacgaggtgtgccactatgccaggcgcaatgataaatcttactgg
ctctccactaccgcccctatccccatgatgcccgtcagccagacccagattccccagtac
atcagccgctgctctgtgtgtgaggcaccctcgcaagccattgctgtgcacagccaggac
atcaccatcccgcagtgccccctgggctggcgcagcctctggattgggtactctttcctc
atgcacactgccgctggtgccgagggtggaggccagtccctggtctcacctggctcctgc
ctagaggactttcgggccactcctttcatcgaatgcagtggtgcccgaggcacctgccac
tactttgcaaacaagtacagtttctggttgaccacagtggaggagaggcagcagtttggg
gagttgcctgtgtctgaaacgctgaaagctgggcagctccacactcgagtcagtcgctgc
caggtgtgtatgaaaagcctatag
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integrated database retrieval system
