Pan paniscus (bonobo): 100984013
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Entry
100984013 CDS
T02283
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pps
Pan paniscus (bonobo)
Pathway
pps04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100984013 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pps04131
]
100984013 (VPS8)
Membrane trafficking [BR:
pps04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100984013 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
Clathrin
zf-RING_2
zf-RING_5
zf-C3H2C3
zf-RING_UBOX
zf-C3HC4
UBA_HOIP
EIF3I
PHD
GED
Motif
Other DBs
NCBI-GeneID:
100984013
NCBI-ProteinID:
XP_063458701
Ensembl:
ENSPPAG00000038646
LinkDB
All DBs
Position
2:182666542..182928965
Genome browser
AA seq
1451 aa
AA seq
DB search
MENEPDHENVEQSLCAKTSEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ
NQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQ
NYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDSVE
KLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG
QIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASKRK
AIVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQMY
DKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMDIT
SLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTAVSFCVD
KCVHFLGQIPKVGMAGLYDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFE
FLIRLHSAEASPEEEIYPYIRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILL
KVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQ
VLLELLQAGGIVQFEESRLIRMAEKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVF
NYIHNILSIPGHSPEEKQSVWQKAMDHIEELVSLKPCKAAELVATHFSGHIETVIKKLQN
QVLLFKFLRSLLDPREGIHINQELLQISPCITEQFIELLCQFNPTQVIETLQVLECYRLE
ETIQITQKYQLHEVTAYLLEKKGDIHGAFLIMLERLQSKLQEVTHQGENTKEDPSLKDVE
DTMVETIALCQRNSHNLNQQQREALWFPLLEAMMAPQKLSSSAIPHLHSEALKSLTMQVL
NSMAAFIALPSILQRILQDPVYGKGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLH
WSLCNLRASVTRGLNPKQDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVE
FEGQTRWTCYKCSSSNKVGKLSENSSEIKKGRITPSQVKMSPSYHQSKGDPTAKKGTSEP
VLDPQQIQAFDQLCRLYRGSSRLALLTELSQNRSSESYRPFSGSQSAPAFNSIFQNENFQ
LQLIPPPVTED
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctctgtgccaagacgagcgaa
gaagagctgaataagtctttcaatctagaagcttcactttcaaaattctcttacatagat
ctggacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactaaatgagactgatgatgaagatgag
tcttttgttcttgaggatcctacattgttaaacattgatactattgattctcactcctat
gatacttcatctgtggcaagctcagatagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcacttcatggatcagttatgcgccattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtagatgctggcttgcctacagcaatt
gcagtgtccagtctgatagcagtgggtacatctcatggattggctttaatatttgatcag
aatcaagctttgcgactctgtctgggtagcactagtgttggaggtcagtatggcgctatc
tctgccctcagtatcaacaatgattgctcaagacttctttgtggctttgctaaaggacag
atcaccatgtgggatttggccagtggaaaacttctaagatcaataacagatgctcatcct
ccaggaacagcaatattgcatatcaagtttacagatgatccaactcttgcaatttgcaac
gacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgagaacctgt
gaatctagatgtctgttcagtggttccaagggtgaagtctgctgtattgagcctctgcat
tctaagcctgagttgaaagatcatcccatcacacagttttcattattggccatggcatct
ctgacaaaaatactggtcattggattgaaaccatccttgaaagtatggatgacttttccc
tatggccggatggatccttccagtgtgccactgctggcctggcactttgtagcagtacaa
aattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctattggta
aagagagatgaatctggagcaatacatgttactaagcaaaagcatcttcacctatactat
gacctcatcaactttacttggataaattcacgcacggttgtgctcttagacagcgtagag
aagttgcatgtgattgatcggcaaacacaagaggaattggagacagtggagatctcagaa
gttcagctggtctacaatagcagccatttcaaatcactagccactggaggaaatgttagc
caggcactggctttggttggagagaaggcttgttaccaatccatcagtagctatggtggt
cagatcttttatttggggacaaaatctgtttatgtgatgatgctgaggagctggagagag
agagtggatcatctcctgaaacaagattgtcttacagaagcgttggctcttgcgtggtct
ttccatgaaggaaaagcaaaagcagtagtgggattatcaggggatgccagtaagcgaaag
gctattgttgcagatcggatggtagaaatcctattccattatgcagatcgagctctgaaa
aagtgcccagaccaaggaaaaatccaagtgatggagcagcattttcaggatatggtgcct
gtcatagttgattactgccttctgctgcagcgaaaggatcttttatttagtcagatgtat
gataaattaagtgagaattcagtggccaaaggagtatttttggagtgccttgagccatat
attttaagtgataaattggtgggaatcacaccccaagtaatgaaagacttgattgttcat
ttccaagataaaaaattaatggaaaatgtggaagcgctcattgtacatatggatatcacc
agcctagatattcagcaggtagttctcatgtgttgggaaaatcgtttatatgatgctatg
atctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaacttttcaga
gtcattgctcctcctctgaatgcaggaaaaacactaacagctgtaagtttctgtgtggac
aaatgtgttcattttcttggccaaatacctaaggttggaatggctggattgtatgatgaa
caagttgttatgggcaataagctccttgtatatattagctgttgtctagcaggtcgtgcc
tatccccttggtgacatccctgaagatcttgttcccttggttaaaaaccaggtttttgaa
tttctaattcgcttgcattcagcagaggcttctcctgaggaagaaatctatccttacatt
cggactttgctacattttgacacaagagaatttctaaatgtattggcactgacttttgaa
gattttaaaaatgacaagcaagctgtggaatatcaacagcgaattgtggatattttgttg
aaagttatggtggagaattcagactttaccccctcacaagtaggatgtctctttaccttc
cttgctcggcagcttgcaaagcctgacaacaccttgtttgtaaacagaacactttttgat
caggtccttgaattcctttgtagtcctgacgatgactcccgacactctgaaagacagcag
gtccttttagaattgctgcaggctggaggcatagttcaatttgaagagagtcgactcatc
cggatggcagaaaaagctgagttctatcaaatttgtgaatttatgtatgaaagagaacac
caatatgacaaaattattgattgctacttacgtgaccctctgcgagaggaagaagtcttt
aattacattcacaatatcttgtccattcccggacacagtccagaggagaagcagtctgta
tggcagaaagcaatggatcacattgaggaacttgtgtccctgaagccttgtaaagctgcg
gagctggttgccacccacttttctggacatattgaaacggtcattaaaaaacttcagaac
caggttttgcttttcaaatttttgaggagtcttcttgacccaagggaaggtattcatata
aatcaagaattactgcaaatatctccttgtatcacagagcagttcattgagctgttgtgt
cagttcaacccaacccaagttatagagactctgcaagtccttgagtgctaccgtctggaa
gaaactattcagattactcagaagtatcaacttcatgaagtcaccgcttatctattggaa
aagaaaggagatattcatggtgccttcctaataatgttagagagactacaaagcaaactt
caagaggtaacacatcaaggtgaaaataccaaagaggatccctcattgaaggatgttgaa
gatactatggtggagaccattgctctttgccagagaaattcacataatttgaaccagcag
caacgtgaggcactttggtttccgttattggaggcaatgatggcccctcagaagctgtcc
agttcagccattcctcatctacactctgaagctctgaagtctttgaccatgcaagtttta
aatagcatggcagcatttattgctcttccatcaattttgcaaagaatcttacaggatcca
gtttatggaaaaggaaaacttggagaaatccagggacttatcttgggaatgttagatacc
tttaactatgaacaaaccctgctggaaacaacaactagccttctaaaccaagatctccat
tggtcattgtgtaacctgagagcttcggtcaccagaggactgaatcccaaacaagattac
tgctctatatgtttgcagcagtacaagagacgccaagaaatggctgatgaaattattgtc
tttagctgtggccatttgtatcactcattctgcctacaaaacaaagaatgcactgtggaa
tttgagggccaaacaagatggacatgctacaaatgcagttcaagtaacaaagtaggaaaa
ctcagtgaaaattcatctgaaattaaaaagggaaggataaccccatcacaggtaaaaatg
tctccatcgtatcatcagtccaaaggggatcccactgctaaaaagggaacctcagaacct
gttctggatccacagcaaatccaagcatttgatcagctttgccgtctctaccgaggaagc
tccaggctggctctcctcacggaactctcccagaatcgcagcagcgagagctataggcca
ttcagtggctcgcagagtgctcctgctttcaacagcatcttccagaatgagaacttccag
ctgcagctcattcctccacctgtgactgaggattga
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