Pan paniscus (bonobo): 100986026
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Entry
100986026 CDS
T02283
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X4
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pps
Pan paniscus (bonobo)
Pathway
pps04140
Autophagy - animal
pps04142
Lysosome biogenesis
pps04145
Phagocytosis
pps04148
Efferocytosis
pps05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
100986026 (VPS39)
04142 Lysosome biogenesis
100986026 (VPS39)
04140 Autophagy - animal
100986026 (VPS39)
04148 Efferocytosis
100986026 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100986026 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pps04131
]
100986026 (VPS39)
Membrane trafficking [BR:
pps04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
100986026 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
LIF1_N
Beta-prop_RIG_2nd
VPS18_solenoid_2nd
DUF4145
KCTD11_21_C
Beta-prop_WDR36-Utp21_1st
Lgl_C
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
100986026
NCBI-ProteinID:
XP_003805658
Ensembl:
ENSPPAG00000035281
UniProt:
A0A2R9BAS9
LinkDB
All DBs
Position
16:complement(31402580..31452291)
Genome browser
AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGE
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKGLAIPYLEHIIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRQKLLMFLEIS
SYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQNK
DGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHSKLDTTKALNLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgctttcgagccagtgccgatcctagaaaagctgcctctgcaaatcgactgt
ctggctgcctgggaggaatggcttcttgtgggaaccaaacaaggacatcttcttctctat
aggattcggaaggacgttggttgcaacagatttgaagtgacactagagaaatccaataag
aacttctccaaaaagattcagcagatccatgtggtttcccagtttaagattctggtcagc
ttgttagaaaataacatttatgtccatgacctattgacatttcaacaaatcactacggtt
tcaaaggcaaagggagcatcactgtttacttgtgacctccagcacacagagaccggtgag
gaggtgttacggatgtgtgtggcagtaaaaaagaagctgcagctctatttctggaaggac
agggaatttcatgaattgcagggggactttagtgtgccagatgtgcccaagtccatggcg
tggtgtgaaaattctatctgtgtgggtttcaagagagactactacctaataagggtggat
ggaaaggggtccatcaaagagctctttccaacaggaaaacagctggagcccttagttgca
cctctggcagatggaaaagtggctgtgggccaggatgatctcaccgtggtactcaatgag
gaagggatctgcacacagaaatgtgccctgaactggacggacataccagtggccatggag
caccagcctccctacatcattgcagtgttgcctcgatatgttgagatccgaacatttgaa
ccgaggcttctggtccaaagcattgaattgcaaaggccccgtttcattacctcaggagga
tcaaacattatctatgtggccagcaatcattttgtttggagactcatccctgtccccatg
gcaacccaaatccaacaacttctccaggacaagcagtttgaattggctctgcagctcgca
gaaatgaaagatgattctgacagtgaaaagcagcaacaaattcatcacatcaagaacttg
tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaaa
cttggcacagatcccacccatgtgatgggcctgtaccctgacctgctgcccacagactac
agaaagcagttgcagtatcccaacccattgcctgtgctctccggggctgaattggagaag
gctcacttagctctgattgactacctgacacagaaacgaagtcaattggtaaagaagctg
aatgactctgatcaccagtcaagcacctccccgctcatggaaggcactcccaccatcaaa
tccaagaagaagctgctacaaatcatcgacaccaccctgctcaagtgctatctccataca
aatgtggccctggtggcccccttgctacgcctggagaacaatcactgccacatcgaggag
agcgagcacgtgctgaagaaggctcacaagtacagtgagcttatcatcctgtatgagaag
aaggggctccacgagaaagctctgcaggtgctcgtggaccagtccaagaaagccaactcc
cctctgaaaggccacgagaggacagtgcagtatctgcagcatctgggcacagaaaacctg
catttgattttctcctactcagtgtgggtgctgagagacttcccagaagatggcctgaag
atatttactgaagatctcccggaagtggagtctctgccacgtgatcgagtcctcggcttc
ttaatagagaattttaagggtctggctattccttatctggaacacatcatccatgtttgg
gaggagacaggctctcggttccacaactgcctgatccagctatactgtgagaaggtgcaa
ggtctgatgaaggagtatctcctgtccttccctgcaggcaaaaccccagtcccagctgga
gaggaagagggtgagctgggagaataccggcaaaagctcctcatgttcttggagatttcc
agctactatgatccaggccggctcatctgtgattttccctttgatggcctcttagaagaa
cgagctctcctgttggggcgcatggggaaacatgaacaagctcttttcatttatgttcac
atcttgaaggatacaaggatggctgaggagtactgccataaacactatgaccaaaacaaa
gatggcaacaaagatgtgtatctgtccctgcttcggatgtacctgtcgccccccagcatt
cactgcctggggccaatcaagctggaactactggagccaaaagccaacctccaggccgct
ctgcaggtcctcgagctgcaccacagcaaactggacaccaccaaggccctcaaccttctg
ccagcaaacactcagatcaatgacatacgcatcttcctggaaaaggtcttggaagaaaat
gcacaaaagaaacggttcaatcaagtgctcaagaaccttctccatgcagaattcctgagg
gtccaggaagagcggattttacaccagcaggtgaagtgcatcatcacagaggagaaggtg
tgcatggtgtgtaagaagaagattgggaacagtgcatttgcaagataccccaatggagtg
gtcgtgcactacttctgttccaaagaggtaaacccagctgacacttga
DBGET
integrated database retrieval system
