Pan paniscus (bonobo): 100987158
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Entry
100987158 CDS
T02283
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
pps
Pan paniscus (bonobo)
Pathway
pps04151
PI3K-Akt signaling pathway
pps04510
Focal adhesion
pps04512
ECM-receptor interaction
pps04820
Cytoskeleton in muscle cells
pps04974
Protein digestion and absorption
pps05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100987158 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100987158 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100987158 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100987158 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100987158 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100987158 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pps00535
]
100987158 (COL9A1)
Proteoglycans [BR:
pps00535
]
Extracellular matrix (ECM) proteoglycans
Others
100987158 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Toxin_R_bind_N
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100987158
NCBI-ProteinID:
XP_054969831
Ensembl:
ENSPPAG00000036128
LinkDB
All DBs
Position
5:complement(90204374..90403331)
Genome browser
AA seq
946 aa
AA seq
DB search
MMKRAQKIPVFFFVCSFLEPWASAAVKRRPRFPVNSNSNGGNELCPKIRIGQDDLPGFDL
ISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFRM
TGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDSQ
WHKIMIGVERSSATLFVDCNRIESLPIKPRGPIDIDGFAVLGKLADNPQVSVPFELQWML
IHCDPLRPRRETCHELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKG
PPGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPKGQKGEPGVPGSRGFPGRGI
PGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPRGTIGFHDGDPLCPNACPPGR
SGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEFGEVGAQGPPGAQGLRGITGIVGD
KGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGSKGDTGL
PGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPGQ
MGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGL
PGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGS
RGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQEHFAEMAA
SLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGE
KGERGPPGRGPKGLPGAIGLPDVAQLLEVRNTATCIQKKYNVSHKCDPGPASYGRNGQDG
ERGPPGVAGIPGVPGPPGPPGLPGFCEPASCTMQAGQRAFNKGPDP
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaagagcacagaaaattccagttttcttctttgtgtgcagtttcctggaaccc
tgggcatctgcagctgtcaagcgtcgccccagattccctgtcaattccaattctaatggt
ggaaatgaactctgtccaaagatcaggattggccaagatgacttaccagggtttgatctg
atctctcagttccaggtagataaagcagcatctagaagagctatccagagagtagtggga
tcagctacattgcaggtggcttacaagttgggaaataatgtagacttcaggattccaact
aggaatttatatcccagtggactgcctgaagaatactccttcttgacgacgtttcgaatg
actggaagcactctcaaaaagaactggaacatttggcagattcaggattcttctgggaag
gagcaagttggcataaagattaatggccaaacacaatctgttgtattttcatacaaggga
ctggatggaagtctccaaacagcagccttttcgaatttgtcctccttgtttgattcccag
tggcataagatcatgattggcgtggagaggagtagtgctactctttttgttgactgcaac
aggattgaatctttacctataaagccaagaggcccaattgacattgatggctttgctgtg
ctgggaaaacttgcagataatcctcaagtttctgttccatttgaacttcaatggatgctg
atccattgtgaccccctgcggcccaggagagaaacttgccatgagctgccagccagaata
acgcccagccagaccaccgacgagagaggtcccccgggtgagcagggtcctcccgggcct
ccgggcccccctggagttccaggcatcgatggcatcgacggtgaccgaggtcctaagggc
cccccgggccccccgggtcctgcaggtgaaccgggaaagccaggagctccaggcaagcct
ggcacacctggcgctgatggattaacaggacctgatggatcccctggctccgttgggcca
aagggacaaaaaggagaacctggtgtgcctggatcgcgtggatttccaggccgtggtatt
cctggaccccctggtcctcctgggacagcaggactccctggagagcttggccgtgtagga
cctgttggtgaccctgggagaagaggaccacctggcccccctggccccccaggacccaga
ggaacaattggctttcatgatggagatccattgtgtcccaatgcctgtccaccaggtcgc
tcaggatatccaggcctaccaggcatgaggggtcataaaggggctaaaggagaaattggt
gaaccaggaagacaaggacacaagggtgaagaaggtgaccagggagaattcggagaagtt
ggagctcaaggacctccaggagcccagggtttgcgaggcatcaccggcatagttggggac
aaaggggaaaaaggtgctcggggcttagatggtgaacctgggcctcagggtcttcctggt
gcacctggtgatcaaggacagcgaggacctccaggagaagcaggtcccaaaggagataga
ggggctgaaggtgctagaggaattcctggtctccctgggtccaaaggagacacgggtttg
ccaggtgtggatggccgtgatgggatccctggaatgcctggaacaaagggtgaaccagga
aaacctgggcctcctggtgatgcaggattgcaggggttaccaggtgtacctggaattcct
ggtgcaaagggtgttgctggtgaaaagggtagcgcaggtgctccagggaagcctggtcag
atgggaaattcaggcaaaccgggccaacaggggcctccaggagaggtgggaccccgagga
ccccgggggcttcctggcagtagaggagaattaggacccgtgggatccccaggcctacca
ggtaaactgggttctctgggtagccctggcctccctggcttgcctgggccccctggactt
cctggaatgaaaggtgacaggggtgtagtcggtgaaccgggtccaaagggtgaacagggt
gcctctggtgaagaaggtgaagcaggagaaaggggggaacttggagatataggattacct
ggcccaaagggatctgcaggtaatcctggggaacctggcttgagagggcctgagggaagt
cgggggcttcctggagtggaaggaccaagaggaccacctggaccccggggcgtgcaggga
gaacagggtgccactggcctgcctggtgtccagggccctccgggtagagcaccgacagat
cagcacattaagcaggtttgcatgagagtcatacaagagcattttgctgagatggctgcc
agtcttaagcgtccagactcaggtgccactgggcttcctggaaggcctggccctcctggt
ccccccggccctcctggagagaatggtttcccaggccagatgggaattcgtggccttccg
ggcattaaggggccccctggtgctcttggtttgaggggacctaaaggtgacttgggagaa
aagggggagcgtggccctccgggaagaggtcccaaaggtttgcctggagctataggtctc
ccagatgttgctcaactattagaagtaaggaatactgctacttgcattcaaaagaaatat
aatgtgagccacaaatgtgacccaggccctgccagctatggcagaaatggccaagacggt
gagcgaggccccccaggggtggcaggaattcctggagtgcctggacccccgggacctcct
gggcttcccggtttctgtgagccagcctcctgcaccatgcaggctggtcagcgagcattt
aacaaagggcctgacccttga
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