Pan paniscus (bonobo): 100987487
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Entry
100987487 CDS
T02283
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03022
Basal transcription factors
pps03420
Nucleotide excision repair
pps05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100987487
09124 Replication and repair
03420 Nucleotide excision repair
100987487
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100987487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pps03021
]
100987487
03400 DNA repair and recombination proteins [BR:
pps03400
]
100987487
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100987487
DNA repair and recombination proteins [BR:
pps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100987487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
ORC3_N
Motif
Other DBs
NCBI-GeneID:
100987487
NCBI-ProteinID:
XP_003806827
Ensembl:
ENSPPAG00000036744
UniProt:
A0A2R9BCR7
LinkDB
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Position
4:complement(44331682..44364276)
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHVTSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELKDQHVYVC
AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPAPSGV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaagcgatgggaaggaggctatgaaagaacatgggag
attcttaaagaagatgaatctggatcacttaaagctacaatagaagacattctattcaag
gcaaagagaaaaagagtatttgagcaccatggacaagttcgacttggaatgatgcgccac
ctttatgtggtagtagatggatcaagaacaatggaagaccaagatttaaagcctaataga
ctgacgtgtactttaaagttgttggaatactttgtagaggaatattttgatcaaaatcct
attagtcagattggaataattgtaactaagagtaaaagagctgaaaaattgactgaactc
tcaggaaacccaagaaaacatgtaacgtctttgaagaaagctgtggatatgacctgccat
ggagagccatctctttataattccctaagcatggctatgcagactctaaaacacatgccc
ggacatacaagtcgagaagtactaatcatctttagcagccttacaacttgcgatccatct
aatatttatgatctaatcaagaccctaaaggcagctaaaattagagtatctgttattgga
ttgtctgcagaagtccgcgtttgcactgtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattacaaagagttgctcacacatcatgtaagtcctcctcct
gctagctcaagttctgaatgctcacttattcgtatgggatttcctcagcacaccattgct
tctttatctgaccaggatgcaaaaccctctttcagcatggcgcatttggatggcaatact
gagccagggcttacattaggaggctatttctgcccacagtgtcgggcaaagtactgtgag
ctacctgttgaatgtaaaatctgtggtcttactttggtgtctgctccccacttggcacgg
tcttaccatcatttgtttcctttggatgcttttcaagaaattcccctagaagaatataat
ggagaaagattttgttatggatgtcagggggagttgaaagaccaacatgtttatgtttgt
gctgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcatgattctctacac
tgttgccctggctgtattcataagattccagctccttcaggtgtttga
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