Pan paniscus (bonobo): 100987738
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Entry
100987738 CDS
T02283
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100987738 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pps03021
]
100987738 (CPSF3)
03019 Messenger RNA biogenesis [BR:
pps03019
]
100987738 (CPSF3)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100987738 (CPSF3)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100987738 (CPSF3)
U7-dependent histone pre-mRNA processing factors
100987738 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
100987738
NCBI-ProteinID:
XP_003826991
Ensembl:
ENSPPAG00000042457
UniProt:
A0A2R9CMZ9
LinkDB
All DBs
Position
12:complement(117053752..117103110)
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDDSILSVTVDGKTANLNLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggagagcgaccagctgctgatccgaccccttggagctggg
caagaagtaggaagatcatgtattattctcgagttcaaaggaagaaaaataatgctcgac
tgtgggatccaccctggcctagaaggaatggatgctcttccttatattgatttaattgac
ccagctgagattgatctcctattaattagtcatttccatttggatcactgtggagctctg
ccctggtttctacagaagacaagtttcaaaggaagaacgtttatgactcatgccacaaaa
gctatttatagatggcttctttctgattatgtcaaagttagtaacatatcagcagacgac
atgctgtataccgagacagatttggaagaaagcatggacaaaattgaaactatcaacttt
catgaagttaaggaagttgcgggaatcaagttttggtgttaccatgcaggtcacgtccta
ggagccgccatgttcatgattgagatcgcaggcgtgaagcttttgtacactggtgatttc
tcaagacaagaagataggcacttaatggcagctgaaattcctaatattaagcctgatatt
cttatcattgaatctacttatgggacccatatccatgagaaacgtgaagagcgagaagca
agattctgtaacactgtccacgatattgtaaacagaggaggcaggggtctcattcctgtc
tttgctcttggaagggctcaggagctgctcttgattctggatgagtactggcagaatcac
ccagaactacatgacattccaatatactatgcatcatctttggccaagaagtgtatggca
gtgtaccagacatatgtaaatgccatgaatgacaaaatccgcaaacagatcaacatcaat
aatccctttgttttcaaacacattagtaacctcaagagcatggatcattttgatgacatt
ggtcccagtgttgtaatggcctccccaggcatgatgcaaagtggcttatccagagaatta
tttgaaagctggtgtactgataagaggaatggtgtcattatagcaggatactgtgtagaa
gggacacttgccaagcacatcatgtctgaacctgaagaaatcactactatgtctggacag
aaattaccactgaaaatgtctgttgattacatttctttctcagctcacacggattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggagaa
cagaacgaaatggccagattgaaagcagcactgattcgagaatatgaagataacgatgaa
gttcacatagaggttcataatcctcggaatacagaagcagtgaccttaaacttcagagga
gaaaaactagccaaggttatgggatttttagcagacaaaaaaccagaacaaggccagcgg
gtctcaggaatacttgttaaaagaaactttaactatcacatactttctccttgcgacctg
tccaattatactgacttggccatgagcactgtgaagcagacccaagccattccgtatact
ggtccctttaatttgctctattaccagctgcagaaattgacaggtgatgtggaagaatta
gaaattcaagaaaaacctgctctgaaagtgttcaaaaatattactgtaatacaagaacca
ggcatggtggtattagaatggctggcaaacccttctaatgatatgtatgcagatacagta
acaactgtgatattggaagttcagtcaaatcccaaaataagaaaaggtgcagtacagaag
gtttctaaaaaattagaaatgcacgtttacagcaagaggttggagatcatgctccaggac
atatttggagaagactgtgtaagtgtaaaggatgactctattcttagcgtcacagtggac
gggaaaactgccaaccttaacttggagacacggactgtagaatgtgaagagggaagtgaa
gacgatgaatccctccgagaaatggtggagctggctgcacagagactgtacgaggccctg
acgccagttcactga
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integrated database retrieval system
