Pan paniscus (bonobo): 100987745
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Entry
100987745 CDS
T02283
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pps04131
]
100987745 (VPS13A)
Membrane trafficking [BR:
pps04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100987745 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
DUF5764
Motif
Other DBs
NCBI-GeneID:
100987745
NCBI-ProteinID:
XP_003811504
Ensembl:
ENSPPAG00000005660
UniProt:
A0A2R8ZDI0
LinkDB
All DBs
Position
11:76337834..76581678
Genome browser
AA seq
3174 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQLDVPFKVKVG
HIGNLKLIIPWKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEE
AKQKVVDQEQHLLEKQDTFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQ
NLSMQTTDQYWVPCLHDETEKLVRKLIRLDNLFAYWNVKSQMFYLSDYDNSLDDLKNGIV
NENIVPEGYDFVFRPISANAKLVMNRRSDFDFSAPKINLEIELHNIAIEFNKPQYFSIME
LLESVDMMAQNLPYRKFKPDVPLHHHAREWWAYAIHGVLEVNVCPRLWMWSWKHIRKHRQ
KVKQYKELYKKKLTSKKPPGELLVSLEELEKTLDVFNITIARQTAEVEVKKAGYKIYKEG
VKDPEDNKGWFSWLWSWSEQNTNEQQPDVQPETLEEMLTPEEKALLYEAIGYSETAVDPT
LLKTFEALKFFVHLKSMSIVLRENHQKPELVDIVIEEFSTLIVQRPGAQAIKFETKIDSF
HITGLPDNSEKPRLLSSLDDAMSLFQITFEINPLDETVSQRCIIEAEPLEIIYDARTVNS
IVEFFRPPKEVHLAQLTAATLTKLEEFRSKTATGLLYIIETQKVLDLKINLKASYIIVPQ
DGIFSPTSNLLLLDLGHLKVTSKSRSELPDVKQGEANLKEIMDRAYDSFDIQLTSVQLLY
SRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIYGKLPLISLRISDK
KLQGIMELIESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIPLLELPSVSEDDSE
EEFFDAPCSPLEEPLQFPTGVKSIRTRKLQKQDCSVNMTTFKIRFEVPKVLIEFYHLVGD
CELSVVEILVLGLGAEIEIRTYDLKANAFLKEFCLKCPEYLDENKKPVYLVTTLDNTMED
LLTLEYVKAEKNVPDLKSTYNNVLQLIKVNFSSLDIHLHTEALLNTINYLHNILPQSEEK
SAPVSTTETEDKGDVIKKLALKLSTNEDIITLQILAELSCLQIFIQDQKRNISEIKIEGL
DSEMIMRPSETEINAKLRNIIVLDSDITAIYKKAVYITGKEVFSFKMVSYMDATAGSAYT
DMNVVDIQVNLIVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEATVQAAGMAATGVKEL
ARRSSRMALDINIKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSSPPPVIDLI
TIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWEWYQEVPCFNVNAQLKPME
FILSQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSGVTTNASHHSGGATVVTAAV
VEVHSRASLVKTTLNISFKTDDLTMVLYSPGPKQASFTDVRDPSLKLAEFKLENIISTLK
MYTDGSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDIKYRKVRDGCVTDA
VFQEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQESVKWEINVIIKN
PEIVFVADMTKNDAPALVITTQCEICYKGNLENSTMTAAIKDLQVRACPFLPVKRKGKIT
TVLQPCDLFYQTTQKGTDPQVIDMSVKSLTLKVSPVIINTMITITSALYTTKETIPEQTA
SSTAHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMNIDSIFIVLEAGIGHR
TVPMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPW
NLGIKMKKKAKMAIVESDPEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLVKAF
TEAATGSSADFVKDLAPFMILNSLGLTISVSPSDSFSVLNIPVAKSYVLKNGESLSMDYI
RTKDNDHFNAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQ
IDTVEGSKKVTIRSPVQIRNHFSVPLSVYERDTLLGTASPENEFNIPLGSYRSFIFLKPE
DENYQMCEGIDFEEIIKNDGALLKKKCRSKNLSKESFLINIVPEKDNLTSLSVYSEDGWD
LPYIMHLWPPILLRNLLPYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDY
LNHDWKSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNK
TGRMLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSH
GAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDL
EQCIPFWPEYASSKLLIQVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHST
VITFLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKW
RCRKSHGEVTQKDDMMMPIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVAYESEKAELA
EQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLERE
FKEYTESSPSEDKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQ
SSFRIQIYRIQVQNQIHGAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISR
IKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQ
SQVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQD
VVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGV
EAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDED
YQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGK
GLVGAVARPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQ
MLQVMENGRFAKYKYFTHVMINKTDMLMITRRGVLFVTKGTFGQLTCEWQYSFDEFTKEP
FIVHGRRLRIEAKERVKSVFHAREFGKIINFKTPEDARWILTKLQEAREPSPSL
NT seq
9525 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
gacttggacacgtcccagctctctctgggcatctggaaaggagctgtggccctcaagaat
cttcaaattaaagaaaatgccctgagtcaactggatgtaccatttaaagttaaagttggt
cacataggtaatcttaaacttataattccatggaaaaacctttatactcaacctgttgaa
gccgtattggaagaaatttatttacttatagtgccttcctctagaataaaatatgatcct
ttaaaagaagagaaacaactcatggaagcaaagcaacaggaactgaaaagaatagaagaa
gcaaaacaaaaagtagttgatcaagaacaacatctgctggaaaaacaggacacttttgca
gaaaaattagttacacagatcataaaaaatcttcaggtgaaaatttccagtatccatatt
cgttatgaagatgatatcacaaatcgggacaaaccgctgtcatttggtatttcccttcaa
aatctgagcatgcagacaactgatcaatactgggttccatgtttacatgatgaaactgag
aaactggttcgtaagttaatccgattggataacctgtttgcctattggaatgtgaagtct
cagatgttttatcttagtgattatgataactccttggacgacttgaagaatggcattgtc
aatgaaaatattgttccagaaggttatgattttgtatttcgtcccatatctgctaatgcc
aaacttgtgatgaatcgccgatctgattttgacttttctgcccccaaaataaacttggaa
attgagttacataacatagcaattgaatttaataaaccacagtatttcagtattatggag
cttcttgaatcagttgatatgatggcacaaaatctgccatataggaagttcaaacctgat
gtgcctcttcaccaccatgccagagaatggtgggcttatgctatacatggcgttcttgaa
gtaaatgtttgccccaggttatggatgtggtcatggaagcatattagaaaacataggcaa
aaagtgaagcaatataaagaactgtataaaaaaaagttaacaagtaagaagccacctggt
gaacttctcgtgtctttggaggagttggaaaaaaccttggatgtctttaatataactata
gctagacagacggcagaagttgaggtaaagaaagctggatacaaaatttacaaagaagga
gtaaaagatccagaggataataaagggtggtttagctggctatggtcttggtcagaacaa
aatactaatgaacagcaaccagatgttcaacctgaaactcttgaagaaatgttgacacct
gaagaaaaagctttactctatgaagcaattggctatagtgaaacagcagtcgatccaact
ttactaaaaacatttgaagccttgaagttttttgtccacttgaaaagtatgtctattgtt
ctaagagaaaatcatcaaaaacctgagctggtagatattgtaatagaagaatttagcacc
ttaattgtgcaaagaccaggagcacaagcaataaaatttgaaactaaaatagattcattt
catattactggcttaccagataattcagaaaaaccccgcctcctgtcttcattggatgat
gcaatgtcacttttccaaattacatttgagataaatccattagatgaaactgtttctcag
aggtgtatcatagaagctgaacctttagaaatcatatatgatgcaaggacagtgaatagt
atagtggaattcttcagacctccaaaagaggtacatctagcacagctcactgcagcaact
ttgacaaaactggaagaatttcgcagtaagacagcaacaggtctactgtatattattgaa
acacagaaagttcttgatctcaaaattaatttgaaggcttcatatattatcgtcccacaa
gatggaatttttagtcctacatcaaatctgcttcttttggaccttggtcatctaaaggtg
acgagtaaaagtcgttctgaattaccagatgtgaaacaaggtgaggccaatcttaaagag
ataatggatagagcttatgattcgtttgatattcaacttacaagtgtacaactgctttac
agtagagttggtgataattggagagaagcacgaaaactcagtgtatctacccagcatatt
ttggtacccatgcacttcaatttggaactgtctaaggccatggttttcatggatgtaagg
atgcccaaattcaagatttatggaaagttacctcttatttctttacgaatctcagataaa
aaactacaagggattatggaattgattgaaagcattccaaaacctgaaccagtaactgaa
gtatctgcccctgtcaaatcattccagattcaaacatctacttctttgggaacatcacag
atttcacagaaaataattcctctcttggaacttccatctgtttctgaagatgattcagag
gaggaattttttgatgcaccatgtagtcccttggaagaaccccttcagtttccaactgga
gttaaaagtattcgaaccagaaagttacaaaagcaggattgttcagtaaatatgactaca
tttaaaatacgatttgaagtaccaaaggttttgatcgagttttatcaccttgttggagat
tgtgaactatctgtggtagaaattcttgttttaggattgggtgcagaaattgagattaga
acatacgatttgaaagcaaatgcctttttgaaagagttctgcttaaaatgcccagaatac
ttggatgaaaacaagaaaccagtttatttggttacaaccctggataacacaatggaagac
ctgttaacgctggaatatgtaaaggctgaaaagaatgtacccgacttgaaaagtacctat
aacaatgttttacaattgattaaggtaaatttttcctctttggatattcatttacacact
gaagcacttctgaatacaataaattatcttcataatatccttccgcaatcagaggaaaaa
tcagccccagtgtccactacagagactgaagacaaaggagatgtcattaaaaaattagct
ttaaaactatccacaaatgaagatatcattactttgcagattttagcagaattatcgtgt
ttacagatctttattcaagatcagaaacgtaacatttctgaaattaagattgaagggctt
gattctgagatgattatgaggccttcagaaactgaaataaacgcaaagctaaggaatata
attgttttagattctgatataacagctatatacaaaaaggctgtttatatcactggaaaa
gaagttttcagcttcaaaatggtttcttacatggatgcaactgctggttctgcatacaca
gatatgaatgtggttgacattcaggttaatttaatagttggttgcattgaagtagttttt
gtcacgaaatttctgtattctatattggcttttatagataattttcaggcagctaaacaa
gccttggctgaggcaactgttcaggcagctggaatggctgctactggtgtaaaagaactc
gcacgaaggagttccagaatggcactggatattaacatcaaagccccagttgtggtcatc
ccgcagtctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgaca
aatacctttcatatgataacagagagccagagctctcccccacctgttattgatttgata
acaataaagctgagtgaaatgcgactatacagatctcgatttattaatgatgcataccag
gaagtactggatctactcctgccattaaatcttgaggttgtggttgaacgaaatttatgc
tgggagtggtaccaggaagttccttgttttaatgtaaatgctcagctgaaaccaatggag
ttcattcttagtcaagaagatataacaactatttttaaaacattgcatggcaatatatgg
tatgaaaaagatggtagtgcctcacctgctgtaacaaaagaccaatacagtgccactagt
ggagttactactaatgcttcacaccattcaggaggagcaactgtggtgacagctgctgtg
gtagaagtacattcacgtgcctcactagttaagacaacactaaacataagcttcaaaact
gatgatctcaccatggtgctgtatagtccaggtcctaaacaagcttcctttacagatgtt
cgtgatccttctctgaaacttgctgaatttaaattggagaatattataagtactttaaaa
atgtatacagatggctcaacattttcttccttctcattaaaaaactgtattttagatgat
aaaagacctcatgtcaagaaagcaactcctcgaatgataggactgacagttggttttgac
aaaaaagacatgatggatataaagtacaggaaagtcagagatggttgtgtgactgatgcg
gtctttcaagaaatgtatatttgtgcaagcgtagaatttctgcagactgttgcaaatgtc
tttcttgaggcctacaccacaggcactgctgtagaaaccagtgtgcaaacatggactgct
aaggaagaagtacctacacaggaatcagtgaagtgggaaattaatgttattattaaaaat
cctgaaattgtgtttgtagctgacatgacaaaaaatgatgctcctgctttagtcattaca
acacaatgtgaaatttgctataaaggtaaccttgaaaatagtacaatgactgctgccatt
aaagatctccaagtgagagcctgcccgtttcttccagtcaagagaaaaggcaaaatcact
actgttttgcagccctgtgacttgttttatcaaactactcagaaaggtacagatccacaa
gtgatcgatatgtcagtaaaatccctgacactaaaggtttcaccagttattataaatact
atgattaccataacttcagcactgtatacaactaaggaaaccatcccagaacaaacggct
tcttctactgcacatttatgggaaaagaaggatacaaagactttaaaaatgtggtttctt
gaagaatcaaatgaaactgaaaaaatagctcccacaactgaattggtacccaaaggcgag
atgataaaaatgaacattgattctatttttatagttcttgaggctggaattggtcataga
acagtacctatgcttctggcaaagtcacgtttttcaggggaaggcaaaaactggagttcc
ctaataaatctgcactgtcagcttgagctagaagtgcattattataatgaaatgtttggt
gtatgggagcctttgcttgaacccttagaaattgatcagactgaggattttagaccatgg
aatcttggtatcaagatgaaaaagaaagcaaaaatggccattgttgagtcagatcctgaa
gaagaaaactacaaagtgccagaatataaaactgtcatcagtttccattcaaaagaccaa
ttaaacattacattatccaaatgtggtcttgtaatgttaaacaatttagtcaaggcattt
acagaagctgccactggatcttcagctgacttcgtaaaggatctagcaccatttatgatt
ttaaattcccttggacttactatctctgtttcgccaagtgattcttttagtgtactcaac
attcctgtggcaaaatcatatgtattgaaaaatggagaaagtttaagtatggattatatc
cgaaccaaggacaatgatcatttcaatgcaatgaccagcctaagcagcaaactcttcttc
attcttcttacacctgttaaccattctactgctgataagattcctttaacaaaagtggga
cgacgtctgtacactgtaagacacagagagtctggcgttgaaagatctattgtttgtcaa
attgatacagtagaaggaagtaagaaggtcacaattcgctccccagtgcagataagaaat
catttttcagtcccactgtctgtttacgaacgggataccttattgggaactgcctcacct
gaaaatgaattcaacataccattaggatcttaccgatcattcatttttctgaagccagaa
gatgagaactatcaaatgtgtgaaggaattgactttgaagagattataaaaaatgatggt
gctcttctaaagaagaaatgtagatctaaaaacctttctaaggaatcatttctcattaat
attgttccagaaaaagataatttaacatctctatcagtgtattcagaagatggttgggat
ttaccatacataatgcatttgtggccacctatcctgctccgaaatcttcttccttacaaa
attgcttattatatagagggaattgaaaattcggtttttactctaagtgaaggacattca
gcccagatttgtactgcacagttgggtaaagccaggctacatttaaaattacttgactat
ctcaatcacgattggaaaagtgaatatcacataaagcctaatcagcaagacattagtttt
gtcagttttacttgtgttacagaaatggaaaagactgatttagatattgctgtccatatg
acttacaatactggtcagacagttgtggcatttcatagtccttattggatggtcaataaa
actggccgcatgttacagtacaaagcagatggaattcatcgaaagcatccacctaattat
aaaaagccagttctcttttcttttcagccaaatcacttttttaataacaataaggttcaa
cttatggtaactgatagtgagttgtccaatcagttttcaattgatactgttggtagtcat
ggagctgttaaatgtaaaggcctgaaaatggactatcaagttggtgtcactatagacctg
agcagttttaacattactagaattgtgacatttacccctttttatatgattaaaaacaaa
agcaaataccatatatcagtggctgaagaaggaaatgataaatggctctctcttgatttg
gagcagtgtatccccttttggcctgagtatgcttctagtaaacttcttattcaagtcgaa
aggagtgaagatcctcccaaaaggatatattttaacaagcaggaaaattgtattctattg
cgtctagataacgagcttggaggtattatagcagaagtgaatttggccgagcattctaca
gttattacatttttagattatcatgatggagcagctacattcctcttaataaatcacaca
aagaatgaacttgttcaatacaatcaaagttctctcagtgaaatagaagattccctccct
cctggtaaagcagtgttttatacatgggctgatccggtgggctctagaaggctgaagtgg
agatgtagaaaaagccatggtgaagtaacacagaaggatgatatgatgatgcctatagat
ttgggggaaaagacaatatatttagtttcattctttgaaggtttacaacgcattatttta
ttcactgaagatccaagggtatttaaagtagcatatgaaagtgagaaagcagagttagca
gagcaagaaattgcagtggcattacaagatgttggaatttctcttgtcaacaattacacg
aagcaagaagtagcctatataggcattacaagttctgatgtggtttgggaaacaaagccc
aagaagaaggcaagatggaagccaatgagtgtaaagcacactgagaagttagagagagaa
tttaaggaatatactgaatcttctccttcagaagataaggttattcagttggacactaat
gttccggttcgcctaacacctactggtcataacatgaaaattctgcagccgcatgtaata
gctctacgaagaaattatcttccagcattaaaagtggaatataacacatctgcacatcaa
tcatcatttagaattcagatttacagaatacaggtccaaaatcagatacatggtgctgta
tttccctttgtgttttatcctgttaaacctccaaagtcggtcaccatggattcagcacca
aagccctttacagatgtcagtattgtcatgagatctgcaggacattcccagatatcacgt
attaagtatttcaaagtattgattcaagaaatggatctcaggttagatcttgggtttatc
tatgctttaacagaccttatgacagaagctgaggtgactgaaaatacagaggttgagctt
tttcataaagatatagaagctttcaaagaagaatataaaacagcctcattagtagatcaa
tcacaagtcagcctctatgaatattttcatatatctcctatcaagttacatttaagtgtt
tcactgagttccggcagagaagaagctaaagattcaaaacaaaatggaggactgattcca
gttcattctttaaatcttttgctgaagagtattggtgccacactgacagatgtacaagat
gtagtttttaagcttgcattttttgaactcaactatcagttccatacaacatccgaccta
cagtctgaagtcataagacactattcaaaacaggccattaagcagatgtatgtactcatt
cttggacttgatgttttgggaaatccatttggcttaattagagaattttctgaaggtgta
gaagcatttttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaa
ggaatggcactaggacttaaggcactagttggtggagctgttggtggattggctggtgct
gcctccaaaatcaccggtgctatggctaagggggtagcagctatgaccatggatgaagac
taccaacagaagagaagagaagccatgaataagcaaccagctggttttagagaaggcatc
actcgtggaggaaaaggcttagtttctggatttgttagtggcataacaggaattgttaca
aaaccaatcaaaggagctcaaaaaggaggagcagctggtttctttaaaggtgttgggaaa
ggtttagtaggagcggtagcaaggccaactggaggcatcatagacatggctagcagtaca
tttcagggaataaaaagagctacagagacttctgaagtggagagtctgcgacctcctcgg
ttcttcaatgaagatggagttatcagaccgtacaggttgagggatgggactggaaatcaa
atgttacaggtcatggaaaatggaagatttgcaaaatacaaatattttacccatgtcatg
atcaataagacagatatgctaatgataaccagacgtggtgtattgtttgtaacaaaggga
acatttggacaactcacgtgtgagtggcagtatagttttgatgaatttaccaaagagcca
ttcattgttcatgggagaagattgcgcattgaagcaaaggaacgagtgaagtctgtattt
catgccagagagtttggaaaaataattaacttcaagaccccagaggatgccaggtggatc
ctcacaaagctacaagaagcaagagaaccttctccgagcctctga
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integrated database retrieval system
