Pan paniscus (bonobo): 100988043
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Entry
100988043 CDS
T02283
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03013
Nucleocytoplasmic transport
pps03015
mRNA surveillance pathway
pps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100988043
09122 Translation
03013 Nucleocytoplasmic transport
100988043
03015 mRNA surveillance pathway
100988043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100988043
03041 Spliceosome [BR:
pps03041
]
100988043
03009 Ribosome biogenesis [BR:
pps03009
]
100988043
03012 Translation factors [BR:
pps03012
]
100988043
Enzymes [BR:
pps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100988043
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100988043
mRNA cycle factors
Stress granule specific factors
100988043
Spliceosome [BR:
pps03041
]
Complex C
Other components
EJC/TREX
100988043
Ribosome biogenesis [BR:
pps03009
]
Eukaryotic type
90S particles
Helicases
100988043
Translation factors [BR:
pps03012
]
Eukaryotic type
Initiation factors
eIF-4
100988043
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
100988043
NCBI-ProteinID:
XP_034798939
LinkDB
All DBs
Position
19:complement(96549687..96561728)
Genome browser
AA seq
411 aa
AA seq
DB search
MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQLCETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRRLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
SIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacggccacgatggcgacctcgggctcggcgcgaaagcggctgctcaaagag
gaagacatgactaaagtggaattcgagaccagcgaggaggtggatgtgacccccacgttc
gacaccatgggcctgcgggaggacctgctgcggggcatctacgcttacggttttgaaaaa
ccatcagcaatccagcaacgagcaatcaagcagatcatcaaagggagagatgtcatcgca
cagtctcagtccggcacaggaaaaacagccaccttcagtatctcagtcctccagtgtttg
gatattcagctttgtgaaactcaagctttgatcttggctcccacaagagagttggctgtg
cagatccagaaggggctgcttgctctcggtgactacatgaatgtccagtgccatgcctgc
attggaggcaccaatgttggcgaggacatcaggaagctggattatggacagcatgttgtc
gcgggcactccagggcgcgtttttgatatgattcgtcgcagaaggctaaggacacgtgct
atcaaaatgttggttttggatgaagctgatgaaatgttgaataaaggtttcaaagagcag
atttacgatgtatacaggtacctgcctccagccacacaggtggttctcatcagtgccacg
ctgccacacgagattctggagatgaccaacaagttcatgaccgacccaatccgcatcttg
gtgaaacgtgatgaattgactctggaaggcatcaagcaatttttcgtggcagtggagagg
gaagagtggaaatttgacactctgtgtgacctctacgacacactgaccatcactcaggcg
gtcatcttctgcaacaccaaaagaaaggtggactggctgacggagaaaatgagggaagcc
aacttcaccgtatcctcaatgcatggagacatgccccagaaagagcgggagtccatcatg
aaggagttccggtcgggcgccagccgagtgcttatttctacagatgtctgggccaggggg
ttggatgtccctcaggtgtccctcatcattaactacgatctccccaataacagagaattg
tccatacacagaattgggagatcaggtcgatacggccggaagggtgtggccattaacttt
gtaaagaatgacgacatccgcatcctcagagatatcgagcagtactattccactcagatt
gatgagatgccgatgaacgttgctgatcttatctga
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