Pan paniscus (bonobo): 100988105
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Entry
100988105 CDS
T02283
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-6
KO
K16494
protocadherin beta
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pps04515
]
100988105
Cell adhesion molecules [BR:
pps04515
]
Cadherins
Protocadherins
100988105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
100988105
NCBI-ProteinID:
XP_003829188
Ensembl:
ENSPPAG00000004197
LinkDB
All DBs
Position
4:136395123..136409829
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AA seq
841 aa
AA seq
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MCPGRQSSPGKLLRTNLKISAKTSERVDGRCGDWELKRIFRPYSDIIDMMQTKVQNKKRQ
VAFFILLMLWRGGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGNRQH
LQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAPEFP
AREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKFPEL
VLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAEELYEAQVPEN
NPLGSLVITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFEEIQSY
DVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISPIPENLPEIIVAVFSVSDADS
GHNQQVICSIENNLPFLLRPTVENFYTLVTEGALDRESRAEYNITITVTDLGTPRLKTQQ
SITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQN
PHLPLASLVSINADNGHLFALRSLDYEALQGFEFRVGATDRGSPALSSEALVRVLVLDAN
DNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLF
GVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE
VAPAPAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEGPFPEH
LVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTSRNSFPF
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccgggaaggcagtcgtcgccaggcaagttgttaagaacgaatttaaaaatctct
gcaaagacatccgagagggtcgacggtagatgtggtgattgggagctgaaaaggattttt
cgtccgtattcagacataatagacatgatgcaaactaaagtacagaacaagaaaaggcaa
gtggcgttcttcattttattgatgctttggagaggtggttctgaatcgattcagtattcc
gtattggaggaaacagaaagtggcacgtttgtggccaacttgacaaaggacctgggactg
agggtgggggagctggcttcacggggcgctcgggttgttttcaaagggaacagacaacat
ttgcagtttgatccacagacccatgatttactgctaaatgaaaaactggaccgggaggag
ctgtgtggctccactgagccgtgtgtgctacctttccaagtgttactggaaaaccccttg
cagttttttcaggcttccttgcgagtcagagatataaatgaccacgccccggaattccct
gccagagaaatgctcctgaaaatatcagaaattactatgccaggaaagatatttcctttg
aaaatggcacacgatttagacaccggcagcaacggccttcagaggtacacaatcagctcc
aaccctcacttccacgttctcacccgcaatcgcagcgaaggcaggaagttcccggagctg
gtgctggacaaaccgttggaccgcgaggagcagccccaactcaggctaacgctcattgca
ctggatggcgggtctccgccccggtcagggacctccgagattcagatccaggttttggac
atcaatgacaacgtccccgagtttgctgaggagctctatgaggcgcaagtccctgagaac
aaccccctcggctctctggttattaccgtctcagccagagatttagatgcaggatcgttt
gggaaggtatcttacgccctgtttcaagtcgatgacgtcaaccaacccttcgaaataaat
gcaatcacaggagaaattcggctgagaaaggctttggattttgaggaaattcagtcttat
gacgtggatgttgaggctacagatggtggaggcctatcaggaaaatgctctttagtcgtc
agggtcctggacgtgaatgacaatgcccctgaactcaccatgtcgttcttcatcagcccc
atcccagaaaacttgccagagatcatagtggcagttttcagtgtttcagatgcagactct
ggacataaccaacaggttatttgttcaatagagaacaatctcccctttctactaagacct
accgtggagaatttctacaccctggtaacagaaggcgcgctggacagagagagcagagcc
gagtacaacatcactatcaccgtcactgatttggggacaccaaggctgaaaacccagcag
agcataaccgtgcaggtctccgacgtcaatgacaacgcccccgccttcacccaaacctcc
tacaccttgttcgtccgcgagaacaacagccccgccctgcacatcggcagcgtcagcgcc
acagacagagactcgggcaccaacgcccaggtcacctactcgctgctgccgccccagaac
ccgcacctgcccctcgcctcccttgtctccatcaacgcagacaacggccacctgtttgcc
ctcaggtcgctggactacgaggccctgcagggtttcgagttccgcgtgggcgccacagac
cgcggttccccggctttgagcagcgaggcgctggtgcgagtgctggtgctggacgccaac
gacaactcgcccttcgtgctgtacccgctgcagaacggctccgcgccctgcaccgagctg
gtgccccgggcggccgagccgggctacctggtgaccaaggtggtggcggtggacggcgac
tcgggtcagaacgcctggctgtcgtaccagctgctcaaggccacggagctcggtctgttc
ggcgtgtgggcgcacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgca
gccaagcacaggctggtggtgctggtcaaggacaatggcgagcctccgcgctcggccacc
gccacgctgcacgtgctcctggtggacggcttctcccagccatacctgcctctccctgag
gtggccccggccccggcccaggccgacttgctcaccgtctacctggtggtggcgttggcc
tcggtgtcgtcgctcttcctcttttcggtgctcctgttcgtggcggtgcggctgtgcagg
aggagcagggcggcctcggtgggtcgctgctcggtgcccgagggcccctttccagagcat
ctggtggatgtgagcggcaccgggaccctatcccagagctaccagtacaaggtgtgtctg
acgggaggctcagaaacaaatgagttcaagttcctgaagccgattatgcccaacttccct
cctcagggcactgagagagaaatggaagaaacccccacctctcggaatagcttcccgttc
agttaa
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