Pan paniscus (bonobo): 100988125
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Entry
100988125 CDS
T02283
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pps03041
]
100988125 (RBM39)
Spliceosome [BR:
pps03041
]
Common components
Common spliceosomal components
General mRNP proteins
100988125 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
100988125
NCBI-ProteinID:
XP_008955490
Ensembl:
ENSPPAG00000029710
UniProt:
A0A2R9ACA1
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All DBs
Position
21:complement(41436065..41474664)
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgccaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaagagaagcaaaagtaaggaacggaagcgaagtagagac
agagaaaggaaaaagagcaaaagccgtgaaagaaagcgaagtagaagcaaagagaggcga
cggagccgctcaagaagtcgagatcgaagatttagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagagaa
cctattgataatttaactcctgaggaaagagatgcaaggacagtcttctgtatgcagctg
gcggcaagaattcgaccaagggatttggaagagtttttctctacagtaggaaaggtgcga
gatgtgaggatgatttctgacagaaattcaagacgttccaaaggaattgcttatgtggag
ttcgtcgatgttagctcagtgcctctagcaataggattaactggccaacgagttttaggc
gtgccaatcatagtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctttatgtgggctcattacacttcaac
ataactgaagatatgcttcgtgggatctttgagccttttggaagaattgaaagtatccag
ctgatgatggacagtgaaactggtcgatccaagggatatggatttattacattttctgac
tcagaatgtgccaaaaaggctttggaacaacttaatggatttgaactagcaggaagacca
atgaaagttggtcatgttactgaacgtactgatgcttcgagtgctagttcatttttggac
agtgatgaactggaaaggactggaattgatttgggaacaactggtcgtcttcagttaatg
gcaagacttgcagagggtacaggtttgcagattccgccagcagcacagcaagctctacag
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccagcagactgaagcttcagctttagctgcagctgcctctgttcagcca
cttgcaacacaatgtttccaactctctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggataccgagattaaggatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatca
attgctgcagctattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctgtttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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