Pan paniscus (bonobo): 100988406
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Entry
100988406 CDS
T02283
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03082
ATP-dependent chromatin remodeling
pps04714
Thermogenesis
pps05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100988406 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100988406 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100988406 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pps03000
]
100988406 (ARID1A)
03021 Transcription machinery [BR:
pps03021
]
100988406 (ARID1A)
03036 Chromosome and associated proteins [BR:
pps03036
]
100988406 (ARID1A)
Transcription factors [BR:
pps03000
]
Eukaryotic type
Helix-turn-helix
ARID
100988406 (ARID1A)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100988406 (ARID1A)
Chromosome and associated proteins [BR:
pps03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100988406 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
100988406
NCBI-ProteinID:
XP_008959906
Ensembl:
ENSPPAG00000035294
UniProt:
A0A2R9B7U2
LinkDB
All DBs
Position
1:complement(200085631..200171818)
Genome browser
AA seq
2285 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGP
AVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEPP
GGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGL
AALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGS
GAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAASGGTPQPTATPTLNQLLTS
PSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAP
MSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQP
YGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQ
QPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTT
QQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQ
ELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGV
STSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPG
NQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQI
HTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQM
HGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAM
HVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGM
AASPEMMGLGDVKLTPAPKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERK
MWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLN
VGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSM
QGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQK
RNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYS
RAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSP
SRYPPQQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPP
AKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAT
AATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQG
RNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAP
VPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPV
PASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPG
QRTLLDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVVENDEEIAFSGKDKPASEN
SEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFE
SKTELLPSRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSS
TLTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKR
CVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQG
VSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQ
DPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKN
PVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQN
PPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF
LIGQS
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagccgagcagcagcagcgggaggaggcggggggcgaggcggcggcg
gcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggcccc
gccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaatggg
ggtggcggcggcggcggagccggcagcggcggcgggcccggcgcggagccggacctgaag
aactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgccc
ggcggcggcggtggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggcc
gccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtc
gccgccgccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctg
gcagcgctgcagagcggcggcggcgggggcctggagccctacgcggggccccagcagaac
tctcacgaccacggcttccccaaccaccaatacaactcctactaccccaaccgcagcgcc
taccccccgcccgccccggcctacgcgctgagctccccgagaggtggcactccgggctcc
ggcgcggcggcggctgccggctccaagccgcctccctcctccagcgcctccgcctcctcg
tcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctccgcg
gccagcgggggaactccccagcccaccgccacccccaccctcaaccaactgctcacgtcg
cccagctcggcccggggctaccagggctaccccgggggcgactacagtggcgggccccag
gacgggggcgccggcaagggcccggcggacatggcctcgcagtgttggggggctgcggcg
gcggcagctgcggcggcggccgcctcgggaggggcccaacaaaggagccaccacgcgccc
atgagccccgggagcagcggcggcggggggcagccgctcgcccggacccctcagccatcc
agtccaatggatcagatgggcaagatgagacctcagccatatggcgggactaacccatac
tcgcagcaacagggacctccatcaggaccgcagcaaggacatgggtacccagggcagcca
tatgggtcacagaccccgcagcggtacccgatgaccatgcagggccgggcgcagagtgcc
atgggcggcctctcttatacacagcagattcctccttatggacaacaaggccccagcggg
tatggtcaacagggccagactccatattacaaccagcaaagtcctcaccctcagcagcag
cagccaccctactcccagcaaccaccgtcccagacccctcatgcccaaccttcgtatcag
cagcagccacagtctcaaccaccacagctccagtcctctcagcctccatactcccagcag
ccatcccagcctccacatcagcagtccccggctccatacccctcccagcagtccacgaca
cagcagcacccccagagccagcccccctactcacagccacaggctcagtctccttaccag
cagcagcaacctcagcagccagcaccctcgacgctctcccagcaggctgcgtatcctcag
ccccagtctcagcagtcccagcaaactgcctattcccagcagcgcttccctccaccgcag
gagctatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacctccagt
aagggagggcaagaagatatgaacctgagccttcagtcaagaccctccagcttgcctgat
ctatctggttcaatagatgacctccccatggggacagaaggagctctgagtcctggagtg
agcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttc
tctcctcatacctcccctcacctgcctggcatccgaggcccttccccgtcccctgttggc
tctcccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggc
aaccagatgccacctcggccacccagtggccagtcggacagcatcatgcatccttccatg
aaccaatcaagcattgcccaagatcgaggttatatgcagaggaacccccagatgccccag
tacagttccccccagcccggctcagccttatctccgcgtcagccttccggaggacagata
cacacaggcatgggctcctaccagcagaactccatggggagctatggtccccaggggggt
cagtatggcccacaaggtggctaccccaggcagccaaactataatgccttgcccaatgcc
aactaccccagtgcaggcatggctggaggcataaaccccatgggtgccggaggtcaaatg
catggacagcctggcatcccaccttatggcacactccctccagggaggatgagtcacgcc
tccatgggcaaccggccttatggccctaacatggccaatatgccacctcaggttgggtca
gggatgtgtcccccaccagggggcatgaaccggaaaacccaagaaactgctgtcgccatg
catgttgctgccaactctatccaaaacaggccgccaggctaccccaatatgaatcaaggg
ggcatgatgggaactggacctccttatggacaagggattaatagtatggctggcatgatc
aaccctcagggacccccatattccatgggtggaaccatggccaacaattctgcagggatg
gcagccagcccagagatgatgggccttggggatgtaaagttaactccagcccccaaaatg
aacaacaaggcagatgggacacccaagacagaatccaaatccaagaaatccagttcttct
actacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaag
atgtgggtggaccgttatctggccttcactgaggagaaggccatgggcatgacaaatctg
cctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagatt
ggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcaaccaacctcaat
gtgggcacatcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctctat
gcctttgaatgcaagattgaacggggagaagaccctcccccagacatctttgcagctgct
gattccaagaagtcccagcccaagatccagcctccctctcctgcgggatcaggatctatg
caggggccccagactccccagtcaaccagcagttccatggcagaaggaggagacttaaag
ccaccaactccagcatccacaccacacagtcagatccccccattgccaggcatgagcagg
agcaattcagttgggatccaggatgcctttaatgatggaagtgactccacattccagaag
cggaattccatgactccaaaccctgggtatcagcccagtatgaatacctctgacatgatg
gggcgcatgtcctatgagccaaataaggatccttatggcagcatgaggaaagctccaggg
agtgatcccttcatgtcctcagggcagggccccaacggcgggatgggtgacccctacagt
cgtgctgccggccctgggctaggaaatgtggcgatgggaccacgacagcactatccctat
ggaggtccttatgacagagtgaggacggagcctggaatagggcctgagggaaacatgagc
actggggccccacagccgaatctcatgccttccaacccagactcggggatgtattctcct
agccgctaccccccgcagcagcagcagcagcagcagcagcaacgacatgattcctatggc
aatcagttctccacccaaggcaccccttctggcagccccttccccagccagcagactaca
atgtatcaacagcaacagcagaattacaagcggccaatggatggcacatatggccctcct
gccaagcggcacgaaggggagatgtacagcgtgccatacagcactgggcaggggcagcct
cagcagcagcagttgcccccagcccagccccagcctgccagccagcaacaagctgcccag
ccttcccctcagcaagatgtatacaaccagtatggcaatgcctatcctgccactgccaca
gctgctactgagcgccgaccagcaggcggcccccagaaccaatttccattccagtttggc
cgagaccgtgtctctgcaccccctggcaccaatgcccagcaaaacatgccaccacaaatg
atgggcggccccatacaggcatcagctgaggttgctcagcaaggcaccatgtggcagggg
cgtaatgacatgacctataattatgccaacaggcagagcacgggctctgccccccagggc
cccgcctatcatggcgtgaaccgaacagatgaaatgctgcacacagatcagagggccaac
cacgaaggctcgtggccttcccatggcacacgccagcccccatatggtccctctgcccct
gtgccccccatgacaaggccccctccatctaactaccagcccccgccaagcatgcagaat
cacattcctcaggtatccagccctgctcccctgccccggccaatggagaaccgcacctct
cctagcaagtctccattcctgcactctgggatgaaaatgcagaaggcaggtcccccagta
cctgcctcacacatagcacctgcccctgtgcagccccccatgattcggcgggatatcacc
ttcccacctggctctgttgaagccacacagcctgtgttgaagcagaggaggcggctcaca
atgaaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctggtctc
ctggcagagagcacatgggcattagataccatcaacatcctgctgtatgatgacaacagc
atcatgacctttaacctcagtcagctcccagggttgctagagctccttgtagaatatttc
cgacgatgcctgattgagatctttggcattttaaaggagtatgaggtgggtgacccagga
cagagaacgctactggatcctgggaggttcagcaaggtgtctagtccagctcccatggag
ggtggggaagaagaagaagaacttctaggtcctaaactagaagaggaagaagaagaggaa
gtagttgaaaatgatgaggagatagccttttcaggcaaggacaagccagcttcagagaat
agtgaggagaagctgatcagtaagtttgacaagcttccagtaaagatcgtacagaagaat
gacccatttgtggtggactgctcagataagcttgggcgtgtgcaggagtttgacagtggc
ctgctgcactggcggattggtgggggggacaccactgagcatatccagacccactttgag
agcaagacagagctgctgccttcccggcctcacgcaccctgcccaccagcccctcggaag
catgtgacaacagcagagggtacaccagggacaacagaccaggaggggcccccacctgat
ggacctccagaaaaacggatcacagccactatggatgacatgttgtctactcggtctagc
accttgaccgaggatggagctaagagttcagaggccatcaaggagagcagcaagtttcca
tttggcattagcccagcacagagccaccggaacatcaagatcctagaggacgaaccccac
agtaaggatgagaccccactgtgtacccttctggactggcaggattctcttgccaagcgc
tgcgtctgtgtctccaataccattcgaagcctgtcatttgtgccaggcaatgactttgag
atgtccaaacacccagggctgctgctcatcctgggcaagctgatcctgctgcaccacaag
cacccagaacggaagcaggcaccactaacttatgaaaaggaggaggaacaggaccaaggg
gtgagctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaacacc
ttggttacactcgccaacatctcggggcagttggacctatctccataccccgagagcatt
tgcctgcctgtcctggacggactcctacactgggcagtttgcccttcagctgaagcccag
gaccccttttccaccctgggccccaatgccgtcctttccccgcagagactggtcttggaa
accctcagcaaactcagcatccaggacaacaatgtggacctgattctggccacacccccc
ttcagccgcctggagaagttgtatagcactatggtgcgcttcctcagtgaccgaaagaac
ccggtgtgccgggagatggctgtggtactgctggccaacctggctcagggggacagcctg
gcagctcgtgccattgcagtgcagaagggcagtatcggcaacctcctgggcttcctagag
gacagccttgccgccacacagttccagcagagccaggccagcctcctccacatgcagaac
ccaccctttgagccaactagtgtggacatgatgcggcgggctgcccgcgcgctgcttgcc
ttggccaaggtggacgagaaccactcagagtttactctgtacgaatcacggctgttggac
atctcggtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactgttt
ttgattggccagtcatga
DBGET
integrated database retrieval system
