Pan paniscus (bonobo): 100992007
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Entry
100992007 CDS
T02283
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps04064
NF-kappa B signaling pathway
pps04514
Cell adhesion molecules
pps04668
TNF signaling pathway
pps04670
Leukocyte transendothelial migration
pps04933
AGE-RAGE signaling pathway in diabetic complications
pps05143
African trypanosomiasis
pps05144
Malaria
pps05417
Lipid and atherosclerosis
pps05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100992007 (VCAM1)
04668 TNF signaling pathway
100992007 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100992007 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100992007 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
100992007 (VCAM1)
05143 African trypanosomiasis
100992007 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100992007 (VCAM1)
05418 Fluid shear stress and atherosclerosis
100992007 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100992007 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pps04515
]
100992007 (VCAM1)
04090 CD molecules [BR:
pps04090
]
100992007 (VCAM1)
04091 Lectins [BR:
pps04091
]
100992007 (VCAM1)
Cell adhesion molecules [BR:
pps04515
]
Immunoglobulin superfamily
VCAM
100992007 (VCAM1)
CD molecules [BR:
pps04090
]
Proteins
100992007 (VCAM1)
Lectins [BR:
pps04091
]
I-type lectins (Siglecs)
100992007 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
C2-set
Ig_3
ig
Ig_2
V-set
ICAM_N
C2-set_2
ICAM1_3_5_D2
Adhes-Ig_like
Ig_6
C2-set_3
Ig_5
Motif
Other DBs
NCBI-GeneID:
100992007
NCBI-ProteinID:
XP_008958812
Ensembl:
ENSPPAG00000010474
LinkDB
All DBs
Position
1:complement(126290653..126308353)
Genome browser
AA seq
650 aa
AA seq
DB search
MPGKMVVILGASNILWIMFAASQAFKIETTPESRYLAQIGDSVSLTCSTTGCESPFFSWR
TQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPE
IHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEV
TFTPVIEDIGKVLVCRAKLHIDEMDSVPTERQAVKELQVYKKPFTVEISPGPRIAAQIGD
SVMLTCSVMGCESPSFSWRTQIDSPLSGKVRSEGTNSTLTLSPVSFENEHSYLCTVTCGH
KKLEKGIQVELYSFPRDPEIEMSGDLVNGSSVTVSCKVPSVYPLDRLEIELLKGETILKN
IEFLEDTDMKSLENKSLEMTFIPTIEDTGKALVCQAKLHIDDMEFEPKQRQSTQTLYVNV
APRDTIVLVSPSSILEEGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLIST
KMEDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVP
ETWIILKKKAETGDTVLKSIDGAYTIRKAQLKDAGVYECESKNKVGSQLRSLTLDVQGRE
NSKDYFSPELLVLYFASSLVIPAIGMIIYFARKANMKGSYSLVEAQKSKV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaagatggtcgtgatccttggagcctcaaatatactttggataatgtttgca
gcttctcaagcttttaaaatcgagaccaccccagaatctagatatcttgctcagattggt
gactccgtctcattgacttgcagcaccacaggctgtgagtccccatttttctcttggaga
acccagatagatagtccactgaatgggaaggtgacgaatgaggggaccacatctacgctg
acaatgaatcctgttagttttgggaacgaacactcttacctgtgcacagcaacttgtgaa
tctaggaaattggaaaaaggaatccaggtggagatctactcttttcctaaggatccagag
attcatttgagtggccctctggaggctgggaagcccatcacagtcaagtgttcggttgct
gatgtatacccatttgacaggctggagatagacttactgaaaggagatcatctcatgaag
agtcaggaatttctggaggatgcagacaggaagtccctggaaaccaagagtttggaagta
acctttactcctgtcattgaggatattggaaaagttcttgtttgccgagctaaattacac
attgatgaaatggattctgtgcccacagaaaggcaggctgtaaaagaattgcaagtctac
aagaaaccatttactgttgagatctcccctggaccccggattgctgctcagattggagac
tcagtcatgttgacatgtagtgtcatgggctgtgaatccccatctttctcctggagaacc
cagatagacagccctctgagcgggaaggtgaggagtgaggggaccaattccacgctgacc
ctgagccctgtgagttttgagaacgaacactcttatctgtgcacagtgacttgtggacat
aagaaactggaaaagggaatccaggtggagctctactcattccctagagatccagaaatc
gagatgagtggtgacctcgtgaatgggagctccgtcactgtaagctgcaaggttcctagc
gtgtacccccttgaccggttggagattgaattacttaagggggagactattctgaagaat
atagagtttttggaggatacggatatgaaatctctagagaacaaaagtttggaaatgacc
ttcatccctaccattgaagatactggaaaagctcttgtttgtcaggccaagttacatatt
gatgacatggaattcgaacccaaacaaaggcagagtacgcaaacactttatgtcaatgtt
gcccccagagatacaatcgtcttggtcagcccttcctccatcctggaggaaggcagttct
gtgaatatgacatgcttgagccaaggctttcctgctccgaaaatcctgtggagcaggcag
ctccctaatggggagctacagcctctttctgagaatgcaactctcaccttaatttctaca
aaaatggaagattctggggtttatttatgtgaaggaattaaccaggctggaagaagcaga
aaggaagtggaattaattatccaagttactccaaaagacataaaacttacagcttttcct
tctgagagtgtcaaagaaggagacactgtcatcatctcttgtacatgtggaaatgttcca
gaaacatggataatcctgaagaaaaaagcggagacaggagacacagtactaaaatctata
gatggcgcctataccatccgaaaggcccagttgaaggatgcgggagtatatgaatgtgaa
tctaaaaacaaagttggctcacaattaagaagtttaacacttgatgttcaaggaagagaa
aacagcaaagactatttttctcctgagcttctcgtgctctattttgcatcctccttagta
atacctgccattggaatgataatttactttgcaagaaaagccaacatgaaggggtcatat
agtcttgtagaagcacagaaatcaaaagtgtag
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integrated database retrieval system
