Pan paniscus (bonobo): 100992276
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Entry
100992276 CDS
T02283
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X2
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100992276 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pps03000
]
100992276 (CNOT4)
03019 Messenger RNA biogenesis [BR:
pps03019
]
100992276 (CNOT4)
04121 Ubiquitin system [BR:
pps04121
]
100992276 (CNOT4)
Enzymes [BR:
pps01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100992276 (CNOT4)
Transcription factors [BR:
pps03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100992276 (CNOT4)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100992276 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100992276 (CNOT4)
Ubiquitin system [BR:
pps04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100992276 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
zf-CCCH_2
Rtf2
DZR_2
Nup35_RRM_2
zf-C3HC4
Torus
Motif
Other DBs
NCBI-GeneID:
100992276
NCBI-ProteinID:
XP_003813485
Ensembl:
ENSPPAG00000041937
LinkDB
All DBs
Position
6:complement(172183106..172332742)
Genome browser
AA seq
709 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPP
PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD
WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL
SVQDQPSLSPTSLQNSSSHTTAAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHR
AVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAD
NSSSVESLNMKEWQDGLRALLPNININFGGLPNSSPSNANHSAPTSNTATTDSLSWDSPG
SWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPPQTHHSAPFSTQI
PLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagtcctgatgcgaaggaagaccctgtggagtgccctctttgcatggagccc
ttggagatagatgatatcaactttttcccttgcacctgtggctaccagatttgccgattt
tgttggcatcgaattcgcactgatgaaaatgggctttgtcctgcatgtagaaagccatat
ccagaagacccagcagtttataaaccactctcccaggaagagctgcaaaggataaagaat
gagaaaaaacagaaacaaaatgagagaaaacagaaaatatcagaaaatcgcaaacatttg
gctagtgtacgtgtcgtacaaaaaaacctcgtctttgttgtaggtttatctcagcgccta
gcagacccagaggttttaaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcatcaataatagcacatcatatgcaggctcacagggtccaagtgccagtgcttat
gtaacctatatccggtcagaagacgctctcagagccatacagtgtgtcaacaatgtggta
gtagatggcagaacacttaaggcatctctaggtacaacaaaatactgcagttacttctta
aagaatatgcagtgtccaaaacctgactgcatgtatcttcatgaattgggggatgaggcg
gccagcttcacaaaagaggaaatgcaggcgggtaaacaccaagaatatgaacagaagcta
cttcaagaattatataaattaaatcccaattttcttcagctatctacgggttcagttgat
aaaaataagaacaaagtgacaccattgcagagccccattgacaaaccttcagattctctc
agtatagggaacggtgataattcccagcagatatctaacagtgatacgccttcaccacca
cctggtttgtcaaaatccaatccagtcatccccatcagttcatccaatcacagtgcacgg
tccccttttgaaggggcagtaacagagtcacagtcgttattctcagacaattttcgccat
cccaaccctatcccaagtgggcttcctcctttccccagctccccacagacatccagtgac
tggcctacagcaccagaaccacagagcctcttcacatcagaaacaatcccagtatcatcc
tctacagactggcaagcagcttttggctttggttcttctaaacaaccagaggatgacttg
ggttttgatcccttcgatgtcactcgaaaagccttagcagacctgattgagaaggaactg
tccgttcaagaccaaccttccctttcgcccacatctcttcagaactcctcttcacacact
acagccgccaaaggtccaggctctggattcctgcatcctgctgcagctacaaatgccaat
tctctcaatagtaccttttcagtcttgccccagaggttccctcaatttcagcagcaccga
gcggtttataattcattcagttttccaggccaggcagcccgctatccttggatggccttt
ccacgcaatagcatcatgcacttgaaccacacagcaaaccccacctcaaatagtaatttc
ttggacttgaatctcccgccacagcacaacacaggtctgggagggatccctgtagcagac
aacagcagttctgtagagagtttaaatatgaaggaatggcaggacgggctaagggcactt
ctacccaacattaacatcaactttggtggactgcccaattcttccccctccaacgccaac
cacagtgcaccaacgtccaacactgccaccaccgacagcctgagttgggacagccctggc
agctggacagacccagccatcatcacaggtattccagcgtcttcaggaaacagtttagac
tctcttcaagatgacaatcctccacactggctaaaatcccttcaggccctcacagagatg
gacggccccagcgctgctccaccacagacccaccacagcgcccccttcagcacacagatc
ccgctgcacagagccagttggaatccctaccctcctccttcaaacccttccagcttccac
tccccacccccaggctttcagacggccttcagaccccccagcaaaacccccacagattta
ctacagagttcaacactggaccgccattag
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