Pan paniscus (bonobo): 100992737
Help
Entry
100992737 CDS
T02283
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X2
KO
K05236
coatomer subunit alpha
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pps04131
]
100992737 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pps04147
]
100992737 (COPA)
Membrane trafficking [BR:
pps04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100992737 (COPA)
Exosome [BR:
pps04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100992737 (COPA)
Exosomal proteins of bladder cancer cells
100992737 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
100992737
NCBI-ProteinID:
XP_003811927
Ensembl:
ENSPPAG00000028679
UniProt:
A0A2R9A2F0
LinkDB
All DBs
Position
1:89508475..89562373
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPAEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPELDISPGAAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagctttcaccccaaa
agaccttggatcctgactagtttacataatggggtcatccagttatgggactatcggatg
tgcactctcattgacaagtttgatgaacatgatggtccagtgcgaggcattgacttccat
aagcagcagccactgttcgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcgctgtcttttcacattgcttgggcacttagattatattcgcaccacgttt
tttcatcatgaatatccctggattctgagtgcctccgatgatcagaccatccgagtgtgg
aattggcaatctagaacctgtgtttgtgtgttaacagggcacaaccattatgtgatgtgt
gctcagttccaccccgcagaagacttggtagtatcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctgaggaaaaaaaacctgtcccctggtgcggtggaatcggat
gtgagaggaataactggggttgatctatttggaactacagatgcagtggtgaagcatgta
ctagagggtcacgatcgtggagtaaactgggctgccttccaccccactatgccccttatt
gtatctggggcagatgatcgtcaagtgaagatctggcgtatgaatgaatcaaaggcatgg
gaggttgatacctgccggggccattacaacaatgtatcttgtgctgtcttccaccctcgc
caagagttgatcctcagcaattctgaggacaagagtattcgagtctgggatatgtctaag
cggactggggttcagactttccgcagagaccatgatcgtttctgggtcctagctgctcac
cctaaccttaacctctttgcagcaggccatgatggtggtatgattgtgtttaagctggaa
cgggaacggccagcctatgctgttcatggcaatatgctacactatgtcaaggaccgattc
ttacgacagctggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccagtattcaatatgtcatacaatccagcagaaaatgcagtcctgctttgt
acaagagctagcaatttagagaatagtacctatgacctgtacaccatccctaaagatgcc
gactcccagaatcctgatgcgcctgaagggaaacgatcctcaggcctgacagccgtttgg
gtcgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgtgatgagatcttctatgctggc
acaggcaatctcctgcttcgagatgcggactctatcacactctttgatgtacagcagaag
cggactctggcatctgtgaagatttctaaagtgaaatacgttatctggtcagcagacatg
tcacatgtagcactactagccaaacacgccattgtgatctgtaaccgcaaactggatgct
ttatgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgctgtcaccactggggaccacgggatc
attcgaactctggatttacccatctatgtcacacgggtgaagggcaacaatgtatactgc
ctagacagggagtgtcgtccccgggtactcaccattgatcccactgagttcaaattcaag
ctggccctgatcaacagaaaatatgatgaggtactgcacatggtgaggaatgccaaacta
gttggccagtctattattgcttatctccagaagaagggctatcctgaagtggcactgcat
tttgtcaaggatgagaaaactcgctttagtctggcactggagtgtggaaacattgagatt
gctctggaagcagccaaagcactggatgacaagaactgctgggaaaagctgggagaagtg
gccctgctgcaggggaaccaccagattgtggaaatgtgctatcagcgtaccaaaaacttt
gacaaactttccttcctgtatcttatcactggcaacttagaaaaacttcgcaagatgatg
aagattgctgagatcagaaaggacatgagtggccactatcagaatgccctatacctgggt
gatgtgtcagagcgtgtgcggatcctgaagaactgtggacagaagtccctggcctatctc
acagctgctacccatggcttagatgaagaagctgagagcctaaaggagacatttgaccca
gagaaggagacaatcccagacattgaccctaatgccaagctgctccagccacctgcacct
atcatgccattggataccaattggcctttattgactgtatccaaaggattttttgaaggc
accattgccagcaaagggaagggaggagcactggctgcggacattgacattgacactgtt
ggtacagagggctggggagaggatgcagagctgcagttggatgaagatgggtttgtggag
gctacagaaggtttgggggatgatgctcttggcaagggacaggaagaaggaggtggctgg
gatgtagaagaagatctggagctccctcctgagctggatatatcccctggggcagctggt
ggggctgaagatggtttctttgtgcccccaaccaagggaacaagtccaactcagatctgg
tgtaataactctcagcttccagttgatcacatcctggcaggctctttcgaaacagccatg
cggctccttcatgaccaagtaggggtaatccagtttggcccctacaagcaactgttccta
cagacatacgcccgaggccgcacaacctatcaggctctgccctgcctaccctccatgtat
ggctatcctaatcgcaactggaaggatgcagggctgaagaatggtgtaccagctgtgggc
ctgaagcttaatgacctcatccaacggttgcagctgtgctaccagctcaccacagctggc
aaatttgaggaggctgtggaaaaattccgttccatccttctcagtgtgccacttcttgtt
gtggacaataaacaagagattgcagaggcccagcagctcatcaccatttgccgtgagtac
attgtgggtttgtccatggagacagaaaggaagaagctgcccaaagagactctagaacag
cagaagcgcatctgtgagatggcagcctatttcacccactcaaacctgcagcctgtgcac
atgatcctggtgctgcgtacagccctcaatctgttcttcaagctcaagaacttcaagaca
gctgccacctttgctcggcgcctactagaactcgggcccaagcctgaggtggcccaacag
acccgaaaaatcctgtctgcctgtgagaagaatcccacagatgcctaccagctcaattat
gacatgcacaacccctttgacatttgtgctgcatcatatcggcccatctaccgtggaaag
ccagtagaaaagtgtccactcagtggggcctgctattcccctgagttcaaaggtcaaatc
tgcagggtcaccacagtgacagagattggcaaagatgtgattggtttaaggatcagtcct
ctgcagtttcgctaa
DBGET
integrated database retrieval system
