| Entry |
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| Symbol |
PALB2
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| Name |
(RefSeq) partner and localizer of BRCA2 isoform X1
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| KO |
| K10897 | partner and localizer of BRCA2 |
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| Organism |
pps Pan paniscus (bonobo)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pps00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100992853 (PALB2)
03460 Fanconi anemia pathway
100992853 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:pps03400]
100992853 (PALB2)
DNA repair and recombination proteins [BR:pps03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
100992853 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
100992853 (PALB2)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
18:complement(25014158..25051771)
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| AA seq |
1186 aa
MDEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKIKHSIKKTVEEQDCLSQ
QDFSPQLKHSEPKNKICVYDKLHIKTHLDEETGEKTSITLDVGPESFNPGDGPGGLPIQR
TDDTQEHFPHRVSDPNGEQKQKLPSRRKKQQKRTFISQERDCVFGTDSLRLSGKRLKEQE
EISSKNPARSPVTEIRTHLLSLKSELPDSPEPVTEINEDSVLIPPTAQPEKGVDTFLRRP
NFTRATTVPLQTLSDSGSSQHLEHIPPKGSSELTTHDLKNIRFTSPVSLEAQGKKMTVST
DNLLVNKAISKSGQLPTSSNLEANISCSLNELTYNNLPANENQNLKEQNQTEKSLKSPSD
ALDGRNENLQESEILSQPKSLSLEATSPLSAEKHSCTVLEGLLFPAEYYVRTTRSMSNCQ
RKVALEAVIQSHLDVKKKGFKNKNKDASKNLNLSNEETDQSEIRMSGTCTGQPSSRTSQK
LLSLTKVSSPAGPTEDNDLSRKAVAQAPGRRYRGKRKPACTLASDHYEPLLPTSSLSVVN
RSKEEVTSHKYQHEKLFIRVKGKKSRHQKEDSLSWSNSAYLSLDDDAFTAPFHRDGMLSL
KQQLSFLSITDFQLPDEDFGPLKLEKVKSCSEKPVEPFESKMFGERHLKEGSCIFPEELS
PKRMDTEMEDLEEDLIVLPGKSHPKRPNSQSQHTKTGLSSSILLYTPLNTVAPDDNDRPT
TDMCSPAFPILGTTPAFGPQGSYEKASTEVAGRTCCTPQLAHLKDSVCLASDTKQFDSSG
SPAKPHTTLQVSGRQGQPTCDCDSVPPGTPPPIESFTFKENQLCRNTCQELHKHSVEQTE
TAELPASDSINPGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKA
LDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVL
LKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ
GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK
ESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIW
DLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS |
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| NT seq |
3561 nt +upstreamnt +downstreamnt
atggacgagcctcccgggaagcccctcagctgtgaggagaaggaaaagttaaaggagaaa
ttagcattcttgaaaagggaatacagcaagacactagcccgccttcagcgtgcccaaaga
gctgaaaagattaagcattctattaagaaaacagtagaagaacaagattgtttgtctcag
caggatttctcaccgcagctaaaacactcagaacctaaaaataaaatatgtgtttatgac
aagttacacatcaaaacccatcttgatgaagaaactggagaaaagacatctatcacactt
gatgttgggcctgagtcctttaaccctggagatggcccaggaggattacctatacaaaga
acagatgacacccaagaacattttccccacagggtcagtgaccctaatggtgagcaaaag
cagaagctgccaagcagaagaaagaagcagcagaagaggacatttatttcacaggagaga
gactgtgtctttggcactgattcactcagattgtctgggaaaagactaaaggaacaggaa
gaaatcagtagcaaaaatcctgctagatcaccagtaactgaaataagaactcacctttta
agtcttaaatctgaacttccagattctccagaaccagttacagaaattaatgaagacagt
gtattaattccaccaactgcccaaccagaaaaaggtgttgatacattcctaagaagacct
aatttcaccagggcgactacagttcctttacagactctatcagatagcggtagtagtcag
caccttgaacacattcctcctaaaggtagcagtgaacttactactcacgacctaaaaaac
attagatttacttcacctgtaagtttggaggcacaaggcaaaaaaatgactgtctctaca
gataacctccttgtaaataaagctataagtaaaagtggccaactgcccacaagttctaat
ttagaggcaaatatttcatgttctctaaatgaactcacctacaataacttaccagcaaat
gaaaaccaaaacttaaaagaacaaaatcaaacagagaaatctttaaaatctcccagtgac
gctcttgatggcaggaatgaaaatcttcaggaaagtgagattctaagtcaacctaagagt
cttagcctggaagcaacctctcctctttctgcagaaaaacattcttgcacagtgcttgaa
ggccttctgtttcctgcagaatattatgttagaacaacacgaagcatgtccaattgccag
aggaaagtagccctggaggctgtcattcagagtcatttggatgtcaagaaaaaagggttt
aaaaataaaaataaggatgcaagtaaaaatttaaacctttccaatgaggaaactgaccaa
agtgaaattcggatgtctggcacatgcacaggacaaccaagttcaagaacctctcagaaa
cttctctcattaactaaagtcagctctcctgctgggcccactgaagataatgacttgtct
aggaaggcagttgcccaagcacctggtagaagatacagaggaaaaagaaaaccagcctgc
accctggcatcagatcattatgaaccacttttgccaacttctagcctgtcggttgttaac
aggtccaaggaggaagtcacctcacacaaatatcagcacgaaaaattatttattcgagtg
aaagggaagaaaagtcgtcatcaaaaagaggattccctttcttggagtaatagtgcttat
ttatccttggatgatgatgctttcacggctccatttcatagggatggaatgctgagttta
aagcaacaactgtcttttctcagtatcacagactttcagttacctgatgaagactttgga
cctcttaagcttgaaaaagtgaagtcctgctcagaaaaaccagtggagccctttgagtca
aaaatgtttggagagagacaccttaaagagggcagctgtatttttccagaggaactgagt
cctaaacgcatggatacagaaatggaggacttagaagaggaccttattgttctaccagga
aaatcacatcccaaaaggccaaactcacaaagccagcatacaaagacgggcctttcttca
tccatattactttatactcctttaaatacggttgcgcctgatgataatgacaggcctacc
acagacatgtgttcacctgctttccccatcttaggtactactccagcctttggccctcaa
ggctcctatgaaaaagcatctacagaagttgctggacgaacttgctgcacaccccaactt
gctcatttgaaagactcagtctgtcttgccagtgatactaaacaattcgacagttcaggc
agcccagcaaaaccacataccaccctgcaagtgtcaggcaggcaaggacaacctacctgt
gactgtgactctgtcccgccaggaacacctccacccattgagtcattcacttttaaagaa
aatcagctctgtagaaacacatgccaggagttgcataaacattccgtcgaacagactgaa
acagcagagcttcctgcttctgatagcataaacccaggcaacctacaattggtttcagag
ttaaagaatccttcaggttcctgttccgtagatgtgagtgccatgttttgggaaagagcc
ggttgtaaagagccatgtatcataactgcttgcgaagatgtagtttctctttggaaagct
ctggatgcttggcagtgggaaaaactttatacctggcacttcgcagaggttccagtatta
cagatagttccagtgcctgatgtgtataatctcgtgtgtgtagctttgggaaatttggaa
atcagagagatcagggcattgttttgttcctctgatgatgaaagtgaaaagcaagtacta
ctgaagtctggaaatataaaagctgtgcttggcctgacaaagaggaggctagttagtagc
agtgggaccctttctgatcaacaagtagaagtcatgacgtttgcagaagatggaggaggc
aaagaaaaccaatttttgatgccccctgaggagactatactaacttttgctgaggtccaa
gggatgcaagaagctctgcttggtactactattatgaacaacattgttatttggaattta
aaaactggtcaactcctgaaaaagatgcacattgatgattcttaccaagcttcagtctgt
cacaaagcctattctgaaatggggcttctctttattgtcctgagtcatccctgtgccaaa
gagagtgagtcgttgcgaagccctgtgtttcagctcattgtgattaaccctaagacgact
ctcagcgtgggtgtgatgctgtactgtcttcctccagggcaggctggcaggttcctggaa
ggtgacgtgaaagatcactgtgcagcagcaatcttgacttctggaacaattgccatttgg
gacttacttctcggtcagtgtactgccctcctcccacctgtctctgaccaacattggtct
tttgtgaaatggtcgggtacagactctcatttgctggctggacaaaaagatggaaatata
tttgtataccactattcataa |
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