Pan paniscus (bonobo): 100993196
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Entry
100993196 CDS
T02283
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100993196 (HELZ)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
100993196 (HELZ)
3'-5' decay
Other 3'-5' decay factors
100993196 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
Bac_DnaA
AAA_7
AAA_16
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
100993196
NCBI-ProteinID:
XP_034798647
Ensembl:
ENSPPAG00000036899
LinkDB
All DBs
Position
19:complement(83099365..83273334)
Genome browser
AA seq
1943 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFTGPCPLEIERIKIESL
LYRIASFLQLKNYVQADEDCRHVLREGLAKGEDAFRAVLCCMQLKGKLQPVSTILAKSLT
GESLNGMVTKDLTRLKTLLSETETATSNALSGYHVEDLDEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVSTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KQKLVQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSTNKQQQSPPKGKSLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
TIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPE
SRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTL
LNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHR
PQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILASHLNSFIDENPSGLPIGEALDRI
HGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADW
KLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVP
SPPSSTEHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAP
DGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSS
SSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFS
SPESWVNTTSSTPYQNIPCNGSSGTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSV
LQHLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSSDP
LSLFQELSLGSSSGSNGFYSYFK
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgaaaagtcatgtgaacaagcatgtgaatcacttaagaggcag
gactatgaaatggccctcaagcactgcacagaggcccttctttctcttggccagtactcc
atggcagacttcacagggccttgtccattggaaatagaacgcatcaaaatcgagagtctt
ctctacagaattgcctcatttttgcaactgaaaaattatgtgcaagctgatgaagattgt
agacatgtgctgagagaaggactggccaagggagaggatgcctttcgggcagtgctttgc
tgcatgcagctgaaagggaagctccaacctgtatccaccattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaggatttgacaagactaaaaacacttctctca
gaaacagagacagcaactagtaacgccctctctggatatcacgtggaagacttagatgag
gggtcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggctgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattgtctcctgagaaagtgcttagtgaatgtatagaaggagta
aaggtagagcacaatcctgacctgtcagttactgtcagcaccaaaaaatcccaccagaca
tggacctttgctctcacttgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatctcgaatacctgatgcatgcaaaacagcagctagta
accacagctaaacgttgggattcttcctctaagactattatagattttgaacctaatgag
actactgatttggagaagagccttcttatcagataccaaattcccctctctgctgaccag
ctatttacccagtccgttttagacaaatcattgaccaagagcaactatcagtcacggtta
catgaccttctttatattgaggagatagcccagtataaagaaatcagcaagttcaacctt
aaagtgcaattgcagattctggcaagcttcatgctcactggtgtttctggaggtgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggacgactggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaacagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaggaatatatatttttaaggctatctagggaatgctgtgaagaacttaat
cttcggcctgactgtgacacacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcactatgcactagacaggatcaaggacaatggggttttgtttccagacatc
agtatgactcccaccataccatggagtcctaacagacaatgggatgaacagttggatcct
cgactaaatgcaaaacagaaagaggctgttctggccattaccactccacttgcaatccag
ctgccgcctgtgcttatcatcggaccctatgggacaggcaaaacgttcactctagctcag
gctgtcaaacatattctgcagcaacaggagactagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccccagaaa
gaagatattcttaaacatcgagtggtggttgttacattgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacacacattctattagatgaagctgcccaggcc
atggagtgtgaaaccattatgcctctagcattagcaactcaaaacactcggattgtcttg
gctggtgatcacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcacgtttcattacttgaccgactctatgagcattaccctgctgagttcccatgtagg
attctcctgtgtgagaactaccgctcccatgaagctatcatcaattatacctctgagctt
ttctatgagggcaaactgatggccagtgggaagcagccagcacacaaagatttctaccca
ctaactttctttacagcacgaggagaagatgtacaagaaaaaaatagcacagctttttat
aataatgcagaggtgtttgaagtggtggaacgtgtagaagagttaagaaggaagtggcca
gtagcgtgggggaagttagatgatggcagtattggtgtggtgactccatatgctgatcaa
gtgtttagaatacgtgctgaacttcgaaaaaagagattatctgatgttaatgtagaaagg
gtgctaaatgttcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaaga
catacttgtaaacataaacagacaccaattaaaaagaaagagcaacttctggaagattcc
acagaggacttagattatggttttttatctaactacaagcttctcaatactgccatcaca
agagcacaatccctggttgctgtggtgggtgatcccattgctctgtgctctattggaaga
tgcaggaaattttgggaacggtttattgccctgtgtcatgaaaacagtagcctacatgga
atcacttttgaacagatcaaagcccagttagaggctttagaactaaagaagacatatgtg
ttgaatccgctggcacctgaatttatcccccgggctctaagactgcagcattcaggaagt
accaacaaacagcagcaatcaccacccaaggggaaaagtcttcatcatacccagaatgat
cacttccagaatgatggaattgttcagcccaatccttctgtacttattggcaatcctatt
agagcatatactcctccaccccctcttggacctcacccaaatttgggaaaatctccaagc
cctgttcaaagaatagatcctcacactgggacaagtattctttatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtagg
tttgcagttgatcctcgaattattacacatcaggcagcaatggcctataacatgaaccta
ttacagacacatggacgaggatctcctattccttatggccttggacatcacccacctgtc
accataggccagccacaaaatcagcatcaggagaaggatcaacatgagcaaaatcgaaat
ggtaaaagtgatacaaataattccggacctgaaattaataagattcgaacaccagagaaa
aagccaacagaaccaaaacaggttgatttggaatcaaatccacagaacagaagtcctgaa
tcacgtcctagtgttgtttatcccagtaccaaatttcctcgcaaagataatctcaaccca
agacacataaatcttccccttcctgctccccacgcacagtatgcaatccctaatcgccac
tttcatccccttccccagctaccaagaccaccctttccaattccacagcagcacaccttg
ttaaatcagcagcagaataatttgcctgaacaaccaaatcagataccacctcagccaaat
caggtagtccagcagcaaagtcagttgaatcagcagcctcagcagccgcctcctcagctt
tctcctgcatatcaggcgggacccaacaatgctttttttaatagtgcagttgctcatcgg
ccacagtctcctcctgcagaagctgtaattccggagcagcagccccctcccatgctgcaa
gaaggccacagtcctctgagagccattgcacaacccggccccattcttgcttcacatctg
aatagcttcattgatgagaacccctcgggattacctataggggaggctttagatcgtata
catgggagtgtcgctctggaaacattgaggcagcagcaggcacggttccagcagtggagc
gagcatcatgcctttctcagtcagggcagcgttccatacccacaccatcaccatcctcac
ctccagcatcttcctcagccgcccctgggattacatcagccgccagtgcgggcagactgg
aagctcaccagcagtgccgaagatgaagtggagaccacatactcaaggtttcaagactta
atcagagaactgtctcatcgtgatcaaagtgaaacacgggaactagctgaaatgccacca
cctcaatcaagacttttgcaatatagacaagtacagagtagaagcccaccagcagtccca
tctcccccatccagtacagaacacagtagccacttttctaactttaatgataacagcaga
gacattgaagtagccagcaacccagcatttccacagcgcctcccaccccagatattcaac
tcacctttctcgttgccatctgaacaccttgcccctcctcccttgaaatacctggcacct
gatggagcatggacttttgctaacttgcaacagaatcacctaatggggccaggttttccc
tatggcctacctccattgcctcacaggccaccgcagaacccttttgtacaaatacagaat
catcaacatgctattggtcaagagccatttcacccattgtcatctcgaacagtatcttct
tcttcgctccctagcttagaagagtatgagcccagaggacctggtcggcccttgtaccaa
agaagaatctcatctagctcagttcaaccttgttctgaagaagtaagcactcctcaagac
agtctggctcagtgtaaagagcttcaggaccacagtaaccaatcttctttcaacttttca
tccccggagtcctgggtaaacaccacctcatctactccttatcagaacattccgtgcaat
ggatccagcgggacagctcagcccagagagttgatagcgccacccaagactgtcaaaccc
cctgaggatcaactgaagtcggagaacctcgaggtgtccagttccttcaactacagtgtg
ctgcagcatcttggccagtttccaccccttatgcctaacaagcagatcgcggagtcggcc
aatagcagtagcccccagagctctgcggggggcaagcctgccatgtcctatgccagcgct
ctgcgggcccctccaaagcccaggccccctcctgagcaggccaagaagagtagcgaccct
ctgtctctcttccaggaactgagcctggggagctcatctggcagcaatggcttttactca
tattttaaataa
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integrated database retrieval system
