Pan paniscus (bonobo): 100993466
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Entry
100993466 CDS
T02283
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X6
KO
K14409
protein SMG7
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100993466 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100993466 (SMG7)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100993466 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
100993466 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
100993466
NCBI-ProteinID:
XP_003815659
Ensembl:
ENSPPAG00000031619
UniProt:
A0A2R9AIN4
LinkDB
All DBs
Position
1:complement(66163481..66245785)
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AA seq
1137 aa
AA seq
DB search
MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQNESQEESYNAYP
LPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFHPHEEDLSSISATPLPEEFE
LQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLISIGKWIADNQPRLIQCENEV
GKLLFITEIPELILEDPSEAKENLILQETSVIESLAADGSPGLKSVLSTSRNLSNNCDTG
EKPVVTFKENIKPREVNRDQGRSFPPKEVRRDYSKGITVTKNDGKKDNNKRKTETKKCTL
EKLQETGKQNVAVQVKSQTELRKTPVSEARKTPVTQTPTQASNSQFIPIHHPGAFPPLPS
RPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQ
QRPSGPGPMNQGPQQSQPPSQQPLTSLPAQPTAQSTSQLQVQALTQQQQSPTKAVPALGK
SPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVM
QQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRSVMAQQANIDRRGKRSPGV
FRPEQDPVPRMPFEKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSMFNEVYGKNLTS
SSKAELSPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHN
HNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWHQASTPSGT
WTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcagagcgcgcagtacctccggcaggcagaagtcctgaaggctgacatgaca
gattctaagctgggtccagctgaagtctggacatccaggcaggctctgcaggacctgtac
cagaaaatgctagttaccgatttggaatacgctttagacaagaaagtagaacaggatctc
tggaatcacgcctttaagaatcagatcacaacactacaaggccaggcaaagaatcgagca
aatccgaatcggagtgaagttcaggcaaacctttctctgttcctagaggcagctagtggc
ttctatactcagttattacaagaactgtgtacagtatttaatgtagatttaccatgccgt
gtgaagtcttcccaattgggaattatcagcaataaacagacgcataccagcgccatagtg
aagccacagtctagctcctgttcctatatctgccagcactgcctcgtccaccttggagac
attgctcgatacagaaaccagaccagccaggcagagtcctactataggcatgcagctcag
cttgtcccctccaatggtcagccttataatcagttggctatcttagcttcttccaaagga
gaccatctgaccacaattttctactactgcagaagcattgctgtgaagttccctttccca
gctgcctccactaatctgcaaaaagcactttctaaagcactggaaagccgagatgaggta
aaaaccaagtggggtgtttctgacttcatcaaggcctttattaaattccacggtcatgtg
tacctgagtaagagcttggaaaagttgagccctcttcgagagaaattggaagaacagttt
aagaggctgctattccaaaaagctttcaactctcagcagttagttcatgtcactgtcatt
aacctgtttcaacttcatcaccttcgtgactttagcaatgaaaccgagcagcacagttat
agccaagatgagcagctatgttggacacagttgctggccctctttatgtcttttcttggc
atcctgtgcaagtgtcctctacagaatgagtctcaggaggagtcctacaatgcctatcct
cttccagcagtcaaggtctccatggactggctaagactcagacccagggtctttcaggag
gcagtggtggatgaaagacagtacatttggccctggttgatttctcttctgaatagtttc
catccccatgaagaggacctctcaagtattagtgcgacaccacttccagaggagtttgaa
ttacaaggatttttggcattgagaccttctttcaggaacttggatttttccaaaggtcac
cagggtattacaggggacaaagaaggccagcaacgacgaatacgacagcaacgcttgatc
tctataggcaaatggattgctgataatcagccaaggctgattcagtgtgaaaatgaggta
gggaaattgttgtttatcacagaaatcccagaattaatactggaagaccccagtgaagcc
aaagagaacctcattctgcaagaaacatctgtgatagagtcgctggctgcagatgggagc
ccagggctaaaatcagtgctatctacaagccgaaatttaagcaacaactgtgacacagga
gagaagccagtggttaccttcaaagaaaacattaagccacgagaagtgaacagagaccaa
ggaagaagttttcctcccaaagaggtgagaagggactatagcaaaggaataactgtaact
aagaatgatggaaagaaggacaacaacaagaggaaaactgaaaccaagaaatgcacctta
gaaaagttacaggaaacaggaaagcagaatgtggcagtgcaggtaaaatcccagacagaa
ctaagaaagactccagtgtctgaagccagaaaaacacctgtaactcaaaccccaactcaa
gcaagtaactcccagttcatccccattcatcaccctggagccttccctcctcttcccagc
aggccagggtttccgcccccaacatatgttatccccccgcctgtggcattttctatgggc
tcaggttacaccttcccagctggtgtttctgtcccaggaacctttcttcagcctacagct
cactctccagcaggaaaccaggtgcaagctgggaaacagtcccacattccttacagccag
caacggccctctggaccagggccaatgaaccagggacctcaacaatcacagccaccttcc
cagcaaccccttacatctttaccagctcagccaacagcacagtctacaagccagctgcag
gttcaagctctaactcagcaacaacaatcccctacaaaagctgtgccggctttggggaaa
agcccgcctcaccactctggattccagcagtatcaacaggcagatgcctccaaacagctg
tggaatccccctcaggttcaaggcccattagggaaaattatgcctgtgaaacagccctac
taccttcagacccaagaccccataaaactgtttgagccgtcattgcaacctcctgtaatg
cagcagcagcctctagaaaaaaaaatgaagccttttcccatggagccatataaccataat
ccctcagaagtcaaggtcccagaattctactgggattcttcctacagcatggctgataac
agatctgtaatggcacagcaagcaaatatagaccgcaggggcaaacggtcaccaggagtc
ttccgtccagagcaggatcctgtacccaggatgccgtttgagaaatccttattggagaag
ccctcagagctcatgtcacattcatcctctttcctgtccctcaccggattctctctcaat
caggaaagatacccaaataatagtatgttcaatgaggtatatgggaaaaacctgacatcc
agctccaaagcagaactcagtccctcaatggccccccaggaaacatctctgtattccctt
tttgaagggactccgtggtctccatcacttcctgccagttcagatcattcaacaccagcc
agccagtctcctcattcctctaacccaagcagcctgcccagctctcctccaacacacaac
cataattctgttccattctccaattttggacccattgggactccagataacagggataga
aggactgcagatcggtggaaaactgataagccagccatgggtgggtttggcattgattat
ctctcagcaacgtcatcctctgagagcagttggcatcaggccagcactccgagtggcacc
tggacaggccatggcccctccatggaggattcctctgctgtcctcatggaaagcctaaag
tctatctggtccagttccatgatgcatcctggaccttctgctctggagcagctgttaatg
cagcagaagcagaaacagcaacggggacaaggcaccatgaaccctccacactga
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