Pan paniscus (bonobo): 100994083
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Entry
100994083 CDS
T02283
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42 isoform X2
KO
K14321
nucleoporin-like protein 2
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100994083 (NUP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100994083 (NUP42)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100994083 (NUP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_2
SWIRM
Motif
Other DBs
NCBI-GeneID:
100994083
NCBI-ProteinID:
XP_003807992
Ensembl:
ENSPPAG00000038596
UniProt:
A0A2R9BPI5
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All DBs
Position
6:28038373..28063883
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AA seq
423 aa
AA seq
DB search
MAICQFFLQGRCRFGDRCWNEHPGARGAGGGRQQPQQQPSGNNRRGWNTTSQRYSNVIQP
SSFSKSTPWGGSRDQEKPYFSSFDSGASTNRKEGFGLSENPFASLSPDEQKDEKKLLEGI
VKDMEVWESSGQWMFSVYSPVKKKPNISGFTDISPEELRLEYHNFLTSNNLQSYLNSVQH
LINQWRNRVNELKSLNISTKVALLSDVKDGVNQAAPAFGFGSSQAATFMSPGFPVNNSSS
DNAQNFSFKTNSGFAAASSGSPAGFGSSPAFGAAASTSSGISTSAPAFGFGKPEVTSAAS
FSFKSPAASSFGSPGFSGLPASLATGPVRAPVAPAFGGGSSVAGFGSPGSHSHTAFSKPS
GDTFGNSSISTSLSASSSIIATDNVLFTPRDKLTVEELEQFQSKKFTLGKIPLKPPPLEL
LNF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccatttgtcaattcttccttcaaggccggtgccgctttggagatcggtgctggaac
gaacatcccggtgctaggggtgcaggaggaggacggcagcaaccgcagcagcagccttca
ggtaataatagacgtggatggaatacaactagccagagatattccaatgtcatccagcca
tccagtttctccaaatccacaccatgggggggcagcagagatcaagaaaagccatatttc
agttcttttgattctggagcttcaactaacaggaaggaaggctttggattgtctgagaac
ccatttgcttcacttagtcctgatgagcagaaagatgaaaagaaacttctggaaggaatt
gtaaaagatatggaggtttgggaatcatcagggcagtggatgttttctgtttattcacca
gtgaaaaagaaacctaatatttcaggttttacagacatttcaccagaggaattgaggctt
gaataccataacttcttaaccagcaataacttacagagttatctaaattctgtccaacat
ttaataaatcaatggaggaacagggtaaatgaactgaaaagtctaaatatatcaactaaa
gtagctttgctctctgatgtaaaggatggagtaaatcaagcagcacctgcatttggattt
ggcagtagtcaagcagcaacatttatgtcgccaggctttccagtcaataacagcagcagt
gataatgctcagaactttagttttaaaacaaactctggatttgccgctgcctcttctgga
agccctgctggttttgggagttccccagcatttggagctgcagcctctaccagttcaggt
atctctacttctgctccagcttttggatttgggaagcctgaagtcacatcggctgcatca
ttttcattcaaaagccctgcagcttccagttttggatcacctggattttcaggacttcca
gcttccttggcaacaggtcctgtcagagctccagtggccccagcctttggaggtggcagt
tctgtggctggttttggtagtccgggctcacattctcacactgctttttctaagccatcc
ggtgacacttttggaaatagcagcatatccacttctctgtcagcctcaagcagcatcatt
gcaacagataatgtgttattcacacccagagataaactaacagtagaagaactggaacaa
tttcaatccaagaaatttactctgggaaaaattccattaaagcctccacctctggaactt
ctaaatttttaa
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