Pan paniscus (bonobo): 100994313
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Entry
100994313 CDS
T02283
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X9
KO
K12879
THO complex subunit 2
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03013
Nucleocytoplasmic transport
pps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100994313 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
100994313 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100994313 (THOC2)
03041 Spliceosome [BR:
pps03041
]
100994313 (THOC2)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100994313 (THOC2)
Spliceosome [BR:
pps03041
]
Complex C
Other components
EJC/TREX
100994313 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100994313 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
100994313
NCBI-ProteinID:
XP_008974979
Ensembl:
ENSPPAG00000040720
LinkDB
All DBs
Position
X:complement(123073019..123205906)
Genome browser
AA seq
1593 aa
AA seq
DB search
MASAAVVVPAEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGSITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIAEAKQIVRKLTMVVLSSEKMDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHVTIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSTTPKGNSSNGNSGS
NSNKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTTVPNAESKSTQEREREKEPSRERDIAKEMKSKENVK
GGEKTPVSGSLKSPVPRSDIPEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYI
NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLTKRR
KEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKE
SRHDKEKIEKKEKRDSSGGKEEKKHHKSSDKHR
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcggctgtggtggttcccgcagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgtcggatcctcagtgaaaataaaagccatgatagttca
acatacagagatttccagcaagctctctatgagttgtcatatcatgtaattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttagtgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacagttggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacactggaatcattagggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaagtattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttgttagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatggc
gagacaccatcatctttatacagagttgcagcagtacttctacaatttaatcttattgat
ttagatgatctttatgtacatcttcttccggctgataattgcattatggatgaacacaaa
cgagaaattgcggaagctaagcaaattgttagaaagcttacgatggttgtgttgtcttct
gaaaaaatggatgagcgagagaaagagaaggaaaaagaagaggagaaagtagagaaacca
cctgataaccaaaaacttggcttgttggaagccttattaaagattggtgattggcaacat
gcacagaacattatggatcagatgcctccatactatgcagcttcacacaagctaatagcc
cttgctatttgcaagctcattcatgtaactattgagcctctctaccgaagggttggcgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaacaagagagcaccaaaacaa
gctgagagctttgaagatttgaggagagacgtgttcaatatgttctgttaccttggtcct
cacctttctcacgatcccattttatttgcaaaagtggtgcgcataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagaaaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgcctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattatgatgtcttggcctattgtatcattgaagcttta
gctaatccagaaaaggaaagaatgaaacatgatgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcagtatgttgccaatcagctaaaggcgggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgacaatggagcaacta
gaggctatgactggtggagagcagctaaaagctgagggtggttattttggtcagatcaga
aacactaaaaaatcctctcagagattaaaggatgctctattggaccatgatcttgccctt
cctctctgtctgcttatggctcagcagagaaatggggtaatctttcaggaaggtggagag
aaacatttgaaacttgtgggaaagctctatgaccagtgtcatgataccctggtgcagttt
ggtgggtttttagcatctaatctgagcacagaagattatataaagcgagtgccttcaatt
gatgtactctgtaatgaatttcatacaccccatgatgcagcatttttcctgtctaggcca
atgtatgcccatcatatttcgtcaaagtatgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcataagtacattacatcatgtgagatggtgatggcgcctgtc
catgaagcagtggtctccttacatgtttccaaagtctgggatgacattagccctcaattc
tatgctacattctggtcattgacaatgtatgaccttgcagttccacacaccagctatgaa
cgagaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgccc
ccaaataaaaagaaaaaagagaaggagcgctgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacatgtacagagagttctacagagattgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataatttacacagttgcaagctgtactgaaaatgaagccagtcgatacgga
aggtttctttgctgcatgttagagactgtgaccaggtggcatagtgatagagccacatat
gaaaaggaatgtggaaactatccaggattccttaccatattacgggcaactggatttgat
ggtggaaataaggctgatcaattagactatgaaaattttcgacatgttgtacataaatgg
cattacaaactaaccaaggcatcagtacattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggtcaagctttggaaagaagagtacacaaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgtg
caaaatgggcctggtggtgggccttcttcatcatcaataggaagtgcatctaaatcggat
gaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctagtaccacacctaaagggaattcaagcaatggaaatagtggctct
aacagcaacaaagctgttaaagaaaatgacaaagaaaaagggaaagaaaaagaaaaagag
aaaaaagaaaagactccagctactactccagaggccagggtacttggtaaagatggtaaa
gaaaaaccaaaggaagagcggccaaataaagatgaaaaagcaagagagaccaaggaaaga
acgccgaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgag
aaatttaagaccactgtccccaacgcagaatcaaaatcaactcaagaaagggaaagagag
aaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaaggaaaatgttaaa
ggaggagaaaaaacaccagtttctgggtccttgaaatcacctgttcccagatcagatatt
ccagagcctgaaagggaacaaaaacgccgcaaaattgatactcacccttctccatcacat
tcctccacagtaaaggacagtctcatcgaactcaaggaatcttcagcaaagctctacatt
aatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagatttg
gacaagtcaagggaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagag
cggaaaagggatcactcaaacaacgaccgtgaagtgccaccggacttaaccaagagacgt
aaagaggagaatggaacaatgggggtttcaaaacataaaagtgaaagtccttgtgaatct
ccttatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa
ggcagtgattcatttaaatctgagaagatggataaaatctcctccggtggcaaaaaggag
tccaggcatgataaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaag
gaagagaagaaacatcataagtcctcggacaagcacagataa
DBGET
integrated database retrieval system