KEGG   Pan paniscus (bonobo): 100994313
Entry
100994313         CDS       T02283                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X9
  KO
K12879  THO complex subunit 2
Organism
pps  Pan paniscus (bonobo)
Pathway
pps03013  Nucleocytoplasmic transport
pps03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100994313 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100994313 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100994313 (THOC2)
   03041 Spliceosome [BR:pps03041]
    100994313 (THOC2)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100994313 (THOC2)
Spliceosome [BR:pps03041]
 Complex C
  Other components
   EJC/TREX
    100994313 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100994313 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 100994313
NCBI-ProteinID: XP_008974979
Ensembl: ENSPPAG00000040720
LinkDB
Position
X:complement(123073019..123205906)
AA seq 1593 aa
MASAAVVVPAEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGSITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIAEAKQIVRKLTMVVLSSEKMDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHVTIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSTTPKGNSSNGNSGS
NSNKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTTVPNAESKSTQEREREKEPSRERDIAKEMKSKENVK
GGEKTPVSGSLKSPVPRSDIPEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYI
NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLTKRR
KEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKE
SRHDKEKIEKKEKRDSSGGKEEKKHHKSSDKHR
NT seq 4782 nt   +upstreamnt  +downstreamnt
atggcgtccgcggctgtggtggttcccgcagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgtcggatcctcagtgaaaataaaagccatgatagttca
acatacagagatttccagcaagctctctatgagttgtcatatcatgtaattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttagtgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacagttggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacactggaatcattagggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaagtattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttgttagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatggc
gagacaccatcatctttatacagagttgcagcagtacttctacaatttaatcttattgat
ttagatgatctttatgtacatcttcttccggctgataattgcattatggatgaacacaaa
cgagaaattgcggaagctaagcaaattgttagaaagcttacgatggttgtgttgtcttct
gaaaaaatggatgagcgagagaaagagaaggaaaaagaagaggagaaagtagagaaacca
cctgataaccaaaaacttggcttgttggaagccttattaaagattggtgattggcaacat
gcacagaacattatggatcagatgcctccatactatgcagcttcacacaagctaatagcc
cttgctatttgcaagctcattcatgtaactattgagcctctctaccgaagggttggcgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaacaagagagcaccaaaacaa
gctgagagctttgaagatttgaggagagacgtgttcaatatgttctgttaccttggtcct
cacctttctcacgatcccattttatttgcaaaagtggtgcgcataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagaaaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgcctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattatgatgtcttggcctattgtatcattgaagcttta
gctaatccagaaaaggaaagaatgaaacatgatgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcagtatgttgccaatcagctaaaggcgggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgacaatggagcaacta
gaggctatgactggtggagagcagctaaaagctgagggtggttattttggtcagatcaga
aacactaaaaaatcctctcagagattaaaggatgctctattggaccatgatcttgccctt
cctctctgtctgcttatggctcagcagagaaatggggtaatctttcaggaaggtggagag
aaacatttgaaacttgtgggaaagctctatgaccagtgtcatgataccctggtgcagttt
ggtgggtttttagcatctaatctgagcacagaagattatataaagcgagtgccttcaatt
gatgtactctgtaatgaatttcatacaccccatgatgcagcatttttcctgtctaggcca
atgtatgcccatcatatttcgtcaaagtatgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcataagtacattacatcatgtgagatggtgatggcgcctgtc
catgaagcagtggtctccttacatgtttccaaagtctgggatgacattagccctcaattc
tatgctacattctggtcattgacaatgtatgaccttgcagttccacacaccagctatgaa
cgagaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgccc
ccaaataaaaagaaaaaagagaaggagcgctgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacatgtacagagagttctacagagattgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataatttacacagttgcaagctgtactgaaaatgaagccagtcgatacgga
aggtttctttgctgcatgttagagactgtgaccaggtggcatagtgatagagccacatat
gaaaaggaatgtggaaactatccaggattccttaccatattacgggcaactggatttgat
ggtggaaataaggctgatcaattagactatgaaaattttcgacatgttgtacataaatgg
cattacaaactaaccaaggcatcagtacattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggtcaagctttggaaagaagagtacacaaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgtg
caaaatgggcctggtggtgggccttcttcatcatcaataggaagtgcatctaaatcggat
gaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctagtaccacacctaaagggaattcaagcaatggaaatagtggctct
aacagcaacaaagctgttaaagaaaatgacaaagaaaaagggaaagaaaaagaaaaagag
aaaaaagaaaagactccagctactactccagaggccagggtacttggtaaagatggtaaa
gaaaaaccaaaggaagagcggccaaataaagatgaaaaagcaagagagaccaaggaaaga
acgccgaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgag
aaatttaagaccactgtccccaacgcagaatcaaaatcaactcaagaaagggaaagagag
aaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaaggaaaatgttaaa
ggaggagaaaaaacaccagtttctgggtccttgaaatcacctgttcccagatcagatatt
ccagagcctgaaagggaacaaaaacgccgcaaaattgatactcacccttctccatcacat
tcctccacagtaaaggacagtctcatcgaactcaaggaatcttcagcaaagctctacatt
aatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagatttg
gacaagtcaagggaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagag
cggaaaagggatcactcaaacaacgaccgtgaagtgccaccggacttaaccaagagacgt
aaagaggagaatggaacaatgggggtttcaaaacataaaagtgaaagtccttgtgaatct
ccttatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa
ggcagtgattcatttaaatctgagaagatggataaaatctcctccggtggcaaaaaggag
tccaggcatgataaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaag
gaagagaagaaacatcataagtcctcggacaagcacagataa

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