Pan paniscus (bonobo): 100994843
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Entry
100994843 CDS
T02283
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
pps
Pan paniscus (bonobo)
Pathway
pps04014
Ras signaling pathway
pps04015
Rap1 signaling pathway
pps04024
cAMP signaling pathway
pps04517
IgSF CAM signaling
pps04519
Cadherin signaling
pps04520
Adherens junction
pps04530
Tight junction
pps04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100994843 (AFDN)
04015 Rap1 signaling pathway
100994843 (AFDN)
04024 cAMP signaling pathway
100994843 (AFDN)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100994843 (AFDN)
04519 Cadherin signaling
100994843 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100994843 (AFDN)
04530 Tight junction
100994843 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100994843 (AFDN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
AFDN
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
100994843
NCBI-ProteinID:
XP_034819149
Ensembl:
ENSPPAG00000018981
LinkDB
All DBs
Position
5:188019190..188164989
Genome browser
AA seq
1844 aa
AA seq
DB search
MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI
RVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLNWNK
DDREGRFVLKNENDAIPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ
ASDKDDRPFQGEDVENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPKDYCIAR
VMLPPGAQHSDEKGAKEIILDDDECPLQIFREWPSDKGILVFQLKRRPPDHIPKKTKKHL
EGKTPKGKERADGSGYGSTLPPEKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLY
RLQLSVTEVGTEKLDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVEGQRISE
TTMLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLMVKGPRHKPGIVQETTFDLGGD
IHSGTALPTSKSTTRLDSDRVSSASSTAERGMVKPMIRVEQQPDYRRQESRTQDASGPEL
ILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSNQYRPDISPTER
THKVIAVVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRIT
LDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSL
LRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWAEK
QGLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLNSLQLQALLQNYHCAPDEP
FIPTDLIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGL
QEFLDPLCQRGFCRLIPHTRSPGTWTIYFEGADYESHLLRENTELAQPLRKEPEIITVTL
KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQE
RAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELY
NNSTQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSAYASG
TTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPNY
EEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERHRIEAAMDRKSDSDMWINQSSSL
DSSTSSQEHLNHSSKSVTPASTLTKSGPGRWKTPAAIPATPVAISQPIRTDLPPPPPPPP
VHYAGDFDGMSMDLPLPPPPSTNQIGLPSAQVAAAERKKREEHQRWYEKEKARLEEERER
KRREQERKLGQMRTQSLNPAPFSPLTAQQMKPEKPSTLQRPQETVIRELQPQQQPRTIER
RDLQYITVSKEELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQSKPDRSAE
ESDRLRKLMLEWQFQKRLQESKQKDEDDEEEEEDDVDTMLIMQRLEAERRARQTAMPAIS
VLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRRQEEERTKRDAEEKRRQEEGYYSRL
EAERRRQHDEAARRLLEPEAPGLCRPPLPRDYEPPSPSPAPGAPPPPPQRNASYLKTQVL
SPDSLFTAKFVAYNEEEEEEDCSLAGPNSYPGSTGAAVGAHDACRDAKEKRSKSQDADSP
GSSGAPENLTFKERQRLFSQGQDVSNKVKASRKLTELENELNTK
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcggccgtgacgaggagcggcggaagctggccgacatcatccaccactgg
aacgccaaccggctggacctgttcgagatcagccagccgaccgaggatttggagttccat
ggagtgatgagattttattttcaagataaagctgctggaaactttgcaacaaaatgtatt
cgggtctctagtactgccaccactcaagatgtaatcgaaacgctcgcggagaaatttcga
cctgatatgcgaatgctgtcgtctcccaagtattcactctatgaagtgcatgtcagcgga
gaagaaagaagattggatatagatgagaaacctctagttgtacaactgaattggaacaaa
gatgatcgggaaggcagatttgttcttaagaatgagaatgacgccattcctcctaagaag
gctcaaagtaatggacctgaaaagcaggaaaaagaaggggttatccagaacttcaagaga
actctctcaaagaaagaaaagaaggaaaaaaagaagagagaaaaagaggcattgcgacag
gcatctgataaagatgatagacctttccaaggggaggatgttgaaaattctcgactggct
gctgaggtttacaaagacatgccggaaaccagctttactcgaaccatttctaatcctgag
gtggttatgaaacgacggaggcagcaaaaattggaaaagagaatgcaggaatttcggagc
tcagatgggcggcctgattcaggtggaacattgagaatttatgcagatagtttaaaacca
aatattccctacaagacaatcctgctgtctactacagatcctgcagactttgctgtggct
gaagctttagagaagtatggtctggaaaaagaaaaccctaaggattactgcatcgcccgg
gttatgcttcctcctggagcccagcattctgatgaaaagggtgctaaagaaattattctt
gatgatgatgagtgtcctttacaaatcttcagggaatggccaagtgacaaagggatttta
gtctttcagttgaagaggaggccaccagaccacatcccaaagaaaaccaagaaacacttg
gaaggcaagacacccaagggaaaggagagagctgacgggtctggctatggctccaccctt
cctccggagaagctgccctatttagtagagttaagcccagggagaaggaatcactttgcc
tactacaactatcacacttacgaagatggttctgactctagagataagccaaagctttac
cgccttcagttaagtgttactgaagttgggacagaaaagttggatgacaactctatccag
ttgtttggcccaggaattcagccccatcactgtgaccttaccaacatggatggagtggtc
actgtgacgcccagaagtatggacgcagaaacctacgtggaaggccagcgcatctcagaa
accaccatgctgcagagtggcatgaaagtgcagtttggggcgtcccatgtatttaagttt
gtggaccccagtcaggatcatgctcttgcaaaaagatctgtggatggaggcctgatggtt
aagggcccaagacataaacctggaattgttcaggagacaacttttgatttgggaggagat
attcatagtgggacagcattaccgacaagcaagagcaccactaggctggacagcgacaga
gtgtcgtctgcctctagcacagccgagcggggaatggtgaagccgatgatcagagtagaa
cagcagccagattatcgcaggcaagaaagcagaacacaggatgcttctgggcctgaactg
atactacctgcaagcattgaattcagggaaagttctgaagattcatttttgtctgccatt
ataaattatactaatagctctacagtccactttaagttgtcccctacatatgtattatat
atggcatgccggtatgtattgtccaaccagtacagacctgacatcagccctacagagcgc
acacataaagtcattgcagtcgtcaacaagatggtgagcatgatggagggcgtcatccag
gaagtagaccaggttgaccagaaacagaagaatattgcaggggcacttgccttctggatg
gcaaatgcatctgaacttctcaacttcattaagcaagaccgagaccttagtcggatcaca
ctggatgctcaagatgttttagcacatttggttcaaatggcatttaaatacttggttcac
tgtcttcaatcagaacttaataattacatgccagcctttctagatgaccctgaagagaac
agtctgcaaagaccaaaaatagatgatgtgctgcacacgctcacaggagccatgtccttg
ctacgacgctgcagagtcaatgccgccctgaccatccagctcttctctcagctcttccac
ttcatcaatatgtggctgttcaatagattggtgaccgacccagattcggggctgtgctcc
cattactggggtgcaattatccgtcagcagttgggccatattgaagcctgggctgagaag
caggggctggaactggctgcggactgtcatctgagcaggatcgtgcaggcaacgactttg
cttaccatggataagtatgcacctgatgacattccaaatataaacagcacctgctttaag
ttaaattcactacaacttcaagccttattacagaactatcactgtgcacctgatgagcct
tttatcccaacggatcttatagaaaatgtagtgactgtggctgaaaacactgccgatgag
ctggcccgcagtgatggaagggaagtgcagttggaggaggatcctgatctgcagctgccg
tttcttttgccagaagatggttattcttgtgatgttgtcagaaacattccaaatggttta
caagaatttttagaccctctgtgccagagaggattttgcaggttaattcctcacacacgt
tcaccaggtacttggacaatatattttgaaggtgcagattatgaaagtcaccttctgcgt
gagaacacagagctggctcagcctctgaggaaagaacctgaaataatcactgtgacccta
aaaaagcagaatggaatgggccttagcattgttgcagcaaagggtgctggtcaagataaa
ctaggaatctatgtgaagtcggttgtgaaaggaggtgctgcagatgtggatggacgtcta
gctgcaggtgatcagctcctcagtgtggatggacgaagtctggttggactctctcaggaa
agggcagcagaactcatgacaagaacaagctctgtggtgacactggaagtagcaaagcag
ggtgccatctaccacggtctggccacccttctcaatcagccatcccccatgatgcagaga
atttcagatcgtcgtggctcaggtaaaccccgaccaaagagtgaaggctttgagctctat
aataattcaactcaaaatgggtctcctgagagtcctcagctgccttgggcagaatatagt
gaaccaaagaaattgcctggtgatgacagactgatgaaaaatagagctgatcaccgttcc
agccccaacgtagcaaatcagcctcctagtcctggagggaaaagtgcatatgcctctgga
acaacagcgaagataacatctgtctctactggaaacctctgcactgaggagcagacgcct
ccgcctagacctgaagcctaccccatccccactcagacgtacaccagagagtattttacc
ttcccagcttccaaatcccaggatcggatggctcctcctcagaaccagtggccaaattat
gaggaaaagccgcatatgcacacagatagtaatcattccagtattgcaattcagcgtgtt
acacgttcccaagaagaacttcgagaagataaagcttaccaacttgagcggcatcgaata
gaggcagctatggaccgaaagtctgatagtgatatgtggataaatcagagctcctcactg
gactccagtacctctagccaagagcatctgaaccattcctctaagtcggtcacccctgct
tctacactgaccaaaagtggccctggccgttggaaaacaccagcagccataccggccacc
cctgtggccatctcccagccaatccgaacagacctgcctccgccacccccgccacctcca
gtccactatgccggtgatttcgatggaatgtccatggatttgcctctcccaccaccccct
tccaccaaccagatagggctgccgtctgcacaggtggctgctgccgaacggaaaaagaga
gaagaacatcagcgttggtatgagaaggagaaggcccgcctggaggaggagcgggagagg
aagcggagagagcaggagaggaagttgggccagatgcgcactcagtccttaaaccctgct
ccgttttctcccctgactgcacagcagatgaagcccgaaaagccttccacactccagcgg
ccacaggaaacagtcattcgggagctgcagcctcagcagcagccccgcacgatcgagcgc
agagacttgcagtacatcacagtcagcaaagaggagctttcctcgggggacagtctgtcc
cccgacccgtggaagcgggacgccaaggagaagctggagaagcagcagcagatgcacatc
gtggacatgctgagcaaggagatccaggagctccagagcaaaccggaccgcagcgccgag
gagagcgaccggctgcgcaagctcatgctggagtggcagttccagaagagactccaggag
tcgaagcagaaggacgaagatgacgaggaggaggaggaggacgatgtggacaccatgctg
atcatgcagcgcctggaggctgaacgaagagcgaggcagactgctatgccagcaatctct
gttctagatttgttgcaggacgaggagcggaggcggcagcagcagttagaagagatgcgc
aagcgggaagcggaagaccgagcgaggcaagaggaagagcgccggcggcaggaggaggag
cgaacaaaacgagacgctgaagaaaagaggcgacaggaagaagggtattacagccgcctg
gaagccgagaggcgcagacagcacgacgaggcggcgcgcaggttgctggaacccgaggcg
cccggtctgtgccgccctccgcttccccgggactacgagcccccgtccccgtcccccgcg
cccggcgcccctcctcccccgcctcagcgaaacgcctcctacctcaaaacacaggtcctc
tcccccgactcgctgttcactgccaagtttgttgcatacaatgaggaggaggaggaggag
gactgcagcctagcaggaccaaactcttacccaggatctactggagcagctgttggagcc
catgacgcctgtcgggatgcaaaagagaagcgctctaaaagccaagatgcagattcacct
ggaagttctggggcccctgaaaacttgacattcaaggaacgccagcgtcttttttcacaa
ggtcaagatgtatccaataaagtgaaagcttctcgtaaattaacagaactggagaatgaa
ctgaacacaaagtga
DBGET
integrated database retrieval system