Pan paniscus (bonobo): 100994872
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Entry
100994872 CDS
T02283
Name
(RefSeq) LOW QUALITY PROTEIN: polypyrimidine tract-binding protein 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100994872
03041 Spliceosome [BR:
pps03041
]
100994872
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100994872
Spliceosome [BR:
pps03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100994872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_PARP14_3
RRM_occluded
RRM_3
At2g29880_C
Inhibitor_I68
Motif
Other DBs
NCBI-GeneID:
100994872
NCBI-ProteinID:
XP_003824099
LinkDB
All DBs
Position
15:66389388..66392575
Genome browser
AA seq
541 aa
AA seq
DB search
MDGIVPDIAVGTKRGSDELFSACVTNRPFIMSSNSASAANGHGSKKFKGDSRSARVPSRV
THIQKLPXDVIEGEVISLELPFGKVINLLMLKGKNQAFIKMSTEEAANTMVNYYTSVTPV
LRGQPIYIQFSNHKGLKTDSSPNQARDPAAXQAVNSVQSGNLAWTAPEAAVDAGMGMAGQ
SPVLRIIVENLFYPMTLDVLHQIFSKFGTVKTITFIKDNQFQALLQYKDPENAQHTKLSL
DWQNTYNACHTLCIDFSKLISLNVKYSNDKSRDYXRPDLPSGDSXPSLDQXMAVAFDLSV
PNIHGALAPXAIPSAVAAAAAAGQIAIPGLAGTGNSVLLVSDLNPERVTPQTLCFCFPQS
LFILFSVYGDVQRVKTPFNKKENALVQMADGNQAQLAMSHLNWHKLHGKPPHLIRITPLK
HQNVQLPREGREDQGPTKDYGNSPLHRFKKPGFKNFQNIFPPSATVHLSNIPPSVSEEDL
KVLSSSLGGVVIGFKFFQKDRKMALIQMRSVEEAVQTPIALHNHDVWENHHLRVSFSKST
I
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcccagatatagcagttggtacaaagcggggatctgacgagcttttc
tctgcttgtgtcactaacagaccatttatcatgagcagcaactcggcctctgcagcaaat
ggacatggcagcaagaagttcaaaggtgacagcagaagcgcccgtgtcccctccagagtg
acccacatccagaagctcccantcgacgtcatcgaaggggaggtgatctccctggagctg
ccctttgggaaggtcattaacctcctgatgctgaaggggaaaaaccaggccttcatcaag
atgagcacggaggaggctgccaacaccatggtgaattactacacctcggtgacgcccgtg
ctgcgcggccagcccatctacatccagttctccaaccacaaggggctgaagaccgacagc
tctcccaaccaggcgcgggacccggcggccnctcaggccgtgaactcggtccagtcgggg
aacctggcctggactgccccggaggcggccgtagacgcagggatggggatggccgggcag
agcccggtgctcaggatcatcgtggagaacctcttctaccccatgaccctggatgtgctg
caccagattttctccaagttcggcacagtgaagaccatcacattcatcaaggacaaccag
ttccaggccctgctgcagtacaaggaccccgagaacgcccagcataccaagctgtcgctg
gattggcagaacacctacaacgcctgccacacgctgtgcatcgacttctccaagctcatc
agcctcaacgtaaagtacagcaacgacaagagccgcgactacncacgcccagacctgccc
tccggggacagctagccctcgctggaccagnacatggccgtggccttcgacctttcagtt
cccaacatccacggagccctggcccccncggccatcccctcggcggtggcggcagctgca
gcggcaggccagatcgccatcccgggcctggcggggacaggaaattctgtcttgctggtg
agcgacctcaacccagagagagtcacaccccaaaccctctgtttttgtttcccccaaagc
ctctttattcttttcagcgtctacggggacgtgcagcgcgtgaagaccccgttcaataag
aaggagaacgctctggttcagatggcggacggcaaccaggcccagctggccatgagccac
ctgaactggcacaagctgcacgggaagcccccgcatctcatccgtatcacgcccttgaag
caccagaacgtgcagctgccccgcgagggccgggaggaccagggcccgaccaaggactat
ggcaactcgcccctgcaccgcttcaagaagccaggcttcaagaacttccagaacatattc
ccgccctcggccaccgtgcacctctccaacatcccgccctcagtatccgaggaagatctc
aaggtcctctcctccagccttgggggcgtcgtcataggattcaagttcttccagaaggac
cgcaagatggcgctgatccaaatgcgctccgtggaggaggcggtccagacccccattgcc
ctacacaaccacgacgtctgggagaaccaccacctgcgggtctccttctccaagtccacc
atctag
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