KEGG   Pan paniscus (bonobo): 100995558
Entry
100995558         CDS       T02283                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pps  Pan paniscus (bonobo)
Pathway
pps03030  DNA replication
pps03410  Base excision repair
pps03420  Nucleotide excision repair
pps03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100995558 (RFC4)
   03410 Base excision repair
    100995558 (RFC4)
   03420 Nucleotide excision repair
    100995558 (RFC4)
   03430 Mismatch repair
    100995558 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pps03032]
    100995558 (RFC4)
   03036 Chromosome and associated proteins [BR:pps03036]
    100995558 (RFC4)
   03400 DNA repair and recombination proteins [BR:pps03400]
    100995558 (RFC4)
DNA replication proteins [BR:pps03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100995558 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    100995558 (RFC4)
Chromosome and associated proteins [BR:pps03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100995558 (RFC4)
DNA repair and recombination proteins [BR:pps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100995558 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    100995558 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_assoc_2 DUF815 AAA_16 AAA_30 AAA_22 AAA_11 AAA_24 Mg_chelatase AAA_28 SLFN-g3_helicase RuvB_N Gp44_lid AAA_19 AAA_5 ResIII TIP49_C Viral_helicase1 AAA_7 DUF6096
Other DBs
NCBI-GeneID: 100995558
NCBI-ProteinID: XP_003806680
Ensembl: ENSPPAG00000040954
UniProt: A0A2R9C3P2
LinkDB
Position
2:complement(184666547..184683752)
AA seq 363 aa
MQAFLKGTSISTKPPLTKDRGVAATAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSEGDLRK
AITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSGSFDKLEAVVKDLIDEG
HAATQLVNQLHDVVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCATVMQQLS
QNC
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcaagcatttcttaaaggtacatccatcagtactaaacccccgctgaccaaggatcga
ggagtagctgccactgcgggaagtagcggagagaacaagaaagccaaacccgttccctgg
gtggaaaaatatcgcccaaaatgtgtggatgaagttgctttccaggaagaagtggttgca
gtgctgaaaaaatctttagaaggagcagatcttcctaatctcttgttttacggaccacct
ggaactggaaaaacatccactattttggcagcagctagagaactctttgggcctgaactt
ttccgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttcga
gagaaagtgaaaaattttgctcaattaactgtgtcaggaagtcgttcagatgggaagccg
tgtccgccttttaagattgtgattctggatgaagcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggagaaggagtcgaaaaccacccgattctgtcttatctgt
aactatgtcagtcgaataattgaacccctgacctctagatgttcaaaattccgcttcaag
cctctgtcagataaaattcagcagcagcgattactagacattgccaagaaggaaaatgtc
aaaattagtgatgagggaatagcttatcttgttaaagtgtcagaaggagacttaagaaaa
gccattacatttcttcaaagcgctactcgattaacaggtggaaaggagatcacagagaaa
gtgattacagacattgctggggtaataccagctgagaaaattgatggagtatttgctgcc
tgtcagagtggctcttttgacaaactagaagctgtggtcaaggatttaatagatgagggt
catgcagcaactcagctcgtcaatcaactccatgatgtggttgtagaaaataacttatct
gataaacagaagtcgattatcacagaaaaacttgccgaagttgacaaatgcctagcagat
ggtgctgatgaacatttgcaactcatcagcctttgtgcaactgtgatgcaacagttatct
cagaattgttaa

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