Pan paniscus (bonobo): 100995670
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Entry
100995670 CDS
T02283
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100995670 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pps03032
]
100995670 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
pps03400
]
100995670 (TOPBP1)
DNA replication proteins [BR:
pps03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
100995670 (TOPBP1)
DNA repair and recombination proteins [BR:
pps03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
100995670 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
100995670
NCBI-ProteinID:
XP_034813312
Ensembl:
ENSPPAG00000024667
LinkDB
All DBs
Position
2:complement(131546382..131608412)
Genome browser
AA seq
1522 aa
AA seq
DB search
MSRNDKEPFFVKFLKSSDNSKCFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGVVFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTISCTSLEKEK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKITRYTDINMEDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSIEKGFCQDESIYKTEPRPEAKTMPNSSTPT
SQINTIDSRTLSDVSNISNINASCISESICNSLNSKLEPTLENLENLDVSAFQAPEDLLD
GCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPH
VVGAKWLLECFSKGYMLSEEPYIHANYQQVEIPVSHQPESKAALLKKKNSSFSKKDFAPS
EKHEQADEDLLSQYENDSSTVVEAKTSEARPFNDSTHAEPLNDSTHISLQEENQSSVSHC
VPDVSTITEEGLFSQKSFLVLGFSNENESNIANIIKENAGKIMSLLSRTVVDYAVVPLLG
CEVEATVGEVVTNTWLVTCIDYQTLFDPKSNPLFTPVPVMTGMTPLEDCVISFSQCAGAE
KESLTFLANLLGASVQEYFVRKSNAKKGMFASTHLILKERGGSKYEAAKKWNLPAVTIAW
LLETARTGKRADESHFLIENSSKEERSLETEITNGINLNSDTAEHPGTRLQTHRKTVVTP
LDMNRFQSKAFRAVVSQHARQVAASPAVGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVK
DALAALETPGRPSQQKRKLSTPLSEVIVKNLQLALANSSRNAVALSASPQLKEAQSEKEE
APKPLHKVVVCVSKKLGKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKS
VKERGVHIVSEHWLLDCAQECKHLPESLYPHTYNPKMSLDISAVQDGRLCNSRLLSAVSA
TKDDEPDPLILEENDVDNMATNNKESAPSNGSGKNDSKGVLTQTLEMRENFQKQLQEIMS
ATSIVKPQGQRTSLSRSGCNSASSTPDSTRSARSGRSRVLEALRQSRQTVPDVNTEPSQN
EQIIWDDPTAREERARLASNLQWPSCPTQYSELQVDIQNLEDSPFQKPLHDSEIAKQAVC
DPGNIRVTEAPKHPISEELETPIKDSHLIPTPQAPSIAFPLANPPVAPHPREKIIMIEET
HEELKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLA
SVAAGKWVLHRSYLEACRTAGHFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKK
IQQRQESGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSD
LNKLKPDDSGVNIAEAAAQNVYCLRTEYIADYLMQESPPHVENYCLPEAISFIQNNKELG
TGLSQKRKAPAEKNKIKRPRVH
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgttttttgtgaagtttttaaagtcttcagacaattcc
aaatgtttttttaaagctctcgagtccataaaagaattccaatcagaagaatatcttcag
attattacagaagaagaggcattgaagataaaggagaatgatagatcactttatatctgt
gacccttttagtggcgttgtctttgatcacctcaaaaagcttggctgcagaattgttggt
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagccgaacatcca
gtttataatatggttatgtctgatgtaaccatatcttgtacaagtctggaaaaagaaaaa
agggaagaagttcataaatatgtacaaatgatgggcggacgagtatacagagaccttaat
gtatcagtaactcaccttattgcaggagaagttggtagcaaaaaatatttagttgctgca
aacctgaagaaacctattttgcttccctcttggataaaaacactttgggagaagtcacaa
gagaaaaaaataactagatatactgatataaacatggaagatttcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttatgtggcttagacaggaaagaagttcagcaa
ctcacagttaagcatggaggtcaatacatgggacagttgaaaatgaatgaatgtacacac
ctcattgtgcaagaaccaaaaggtcagaagtatgagtgtgccaagagatggaatgtacac
tgtgtgaccacacagtggttttttgacagtattgagaaaggtttttgtcaggatgaatcc
atatacaagacagaacctagaccagaagcaaagactatgcccaattcttcaactcctacc
agccagatcaacacaattgatagtcgtactctttcagatgtcagcaatatttccaacata
aatgcaagttgcataagtgaatcaatatgtaattcacttaacagcaaactggagcctaca
cttgaaaatctagaaaatctggatgtcagtgcatttcaagcacctgaagatttattagat
ggttgtcggatatatctttgcggttttagtggcagaaagctagataaactgagaagactt
attaacagtggaggtggagttcgttttaaccagctaaatgaagatgtaactcatgttatt
gtgggagattatgatgatgaattgaagcagttttggaataaatcagcccacaggcctcat
gtagtgggagcaaagtggttgctagagtgtttcagtaaaggttatatgctttctgaagaa
ccatatatccatgctaattaccagcaagtggaaattccagtttcacatcagcctgaaagt
aaagcagctcttttaaaaaagaagaacagcagcttctctaagaaagactttgctcctagt
gaaaagcatgagcaagctgatgaagatctgctctctcaatatgaaaatgatagctccaca
gtagttgaggctaagacgtctgaagccaggccctttaatgattctactcatgctgagccc
ttgaatgattctactcacatttctttgcaagaagaaaaccaatcttctgtcagtcattgt
gtccctgatgtttctacaattactgaagaaggcttatttagccaaaagagtttccttgtt
ttgggttttagtaatgaaaatgaatctaacatcgcaaacatcataaaagaaaatgctggg
aaaatcatgtcccttctgagcagaactgttgtggattatgctgtggttcctctgctgggg
tgtgaagtggaagccactgtgggagaagttgttacaaatacatggctggttacttgcata
gactatcagactttgtttgatccaaagtcgaatcctctcttcacaccagtcccagtaatg
acaggaatgactcctttagaggattgtgttatttcatttagccagtgtgctggagcagaa
aaagagtctttaacattcctagcaaacctccttggagcaagtgttcaagaatactttgtt
cgcaaatccaatgcaaagaaaggcatgtttgccagtactcatcttatactgaaagaacgt
ggtggctctaaatatgaagctgcaaagaagtggaatttacctgcagttactatagcttgg
ctgttggagactgctagaacgggaaagagagcagacgaaagccattttctgattgaaaat
tcatctaaagaagaacgaagtttggaaacagaaataacaaatggaatcaatctaaattca
gatactgcagagcatcctggcacacgcctgcaaactcacagaaaaaccgtcgttacacct
ttagatatgaaccgctttcagagtaaagctttccgtgctgtggtctcacaacatgccaga
caggtcgcagcctccccagcagtaggacaaccacttcagaaggagccctcgttacacctg
gatacaccatcaaaatttctgtccaaggacaaactcttcaagccttcctttgatgtgaag
gatgcacttgcagccttggaaactccaggacgtcccagccaacagaaaaggaaactgagt
acgccactctcagaagttattgtcaaaaacttgcaacttgctttggcaaatagctctcga
aatgctgtcgctctttctgccagccctcagctgaaagaggcccagtcagagaaggaagaa
gccccaaagccacttcacaaagtagtggtatgtgttagtaaaaaactcggtaaaaagcag
agtgaactaaatgggatcgcagcctctctaggagcagattacaggtggagttttgatgaa
acagtgactcatttcatctatcaagggcggccaaatgacactaatcgggagtataaatct
gtaaaagaaagaggagtacacattgtttccgagcactggcttttagattgtgcccaagag
tgtaaacatcttcctgaatctctttatccgcatacttataatcccaaaatgagcttggat
atcagtgcagtgcaagatggccgactctgtaatagtcgactactctcagctgtgtctgca
acaaaggatgatgagccagatcctttgattttagaagaaaatgatgtagacaatatggcc
accaataataaagagtcagcaccatcaaatggaagtggaaagaatgactctaaaggagtt
ctgacacagaccttagagatgagagagaactttcagaagcagttacaggagataatgtct
gcaacatcaatagtgaaaccccaagggcagaggacttccctttcaagaagtggttgtaac
agcgcatcttcaacccctgacagcactcgctctgctcgcagtggacgaagtagagtccta
gaggcactgaggcagtctcgtcaaacagtacctgatgtcaacacagagccttcccaaaat
gaacagattatttgggatgatcctacagcaagggaggagagagcaaggcttgccagcaat
ttgcagtggcctagttgtcccacacaatactctgagcttcaggttgacattcaaaacttg
gaggattctccttttcaaaagcctttacatgattcagaaattgctaaacaggctgtctgt
gatcctggaaacatacgtgtgactgaagctcccaaacacccaatctctgaagaactggaa
actcccataaaagatagccacctgatccctacgcctcaagcccccagtattgcctttcca
ctcgccaacccccctgtggctccgcaccctagagaaaagattataatgatagaggagact
catgaagaattaaaaaaacagtacatatttcagttatcatctctgaatcctcaagaacgt
attgactattgtcatctgattgagaaactaggtggattggtgatagaaaagcagtgcttt
gatcccacctgtacacacattgttgtgggacatccacttcgaaacgagaagtatttagcc
tcagtggcagctgggaagtgggtgcttcatcgctcctaccttgaagcctgcaggactgct
ggacacttcgtgcaggaagaagactatgaatggggaagtagttccatacttgatgttttg
actggaatcaatgtacagcaacgaagactagcacttgcagcaatgagatggagaaaaaaa
atccagcaaagacaagaatctggcattgttgagggagcatttagtgggtggaaggttatt
ttacatgtggatcagtctcgagaagcaggcttcaaacgccttcttcagtcaggaggagca
aaggtgctacctggtcattctgtacctttatttaaagaggccacacatcttttttctgac
ttgaataaactgaaaccagatgactcaggagttaatatagcagaagctgctgcccagaac
gtgtactgcttgagaacagaatacattgctgattatctcatgcaggaatcacctcctcat
gtagaaaattactgtctaccagaagctatttcatttattcagaataataaggaacttggg
actggattatcacaaaagaggaaagctcctgcagaaaaaaataaaatcaaacgacctaga
gtacactaa
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integrated database retrieval system
