Pan paniscus (bonobo): 100996061
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Entry
100996061 CDS
T02283
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X2
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pps03000
]
100996061 (SOX5)
Transcription factors [BR:
pps03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100996061 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100996061
NCBI-ProteinID:
XP_003828926
Ensembl:
ENSPPAG00000035103
LinkDB
All DBs
Position
12:62361631..62780805
Genome browser
AA seq
763 aa
AA seq
DB search
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQS
GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGI
PQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL
RINSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGK
VAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSES
RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL
EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF
NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP
HIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaac
aagcctcactctgaggaatttcagccagtttctctgctgacgcaagagacttgtggccat
aggactcccacttctcagcacaatacaatggaagttgatggcaataaagttatgtcttca
tttgccccacacaactcatctacctcacctcagaaggcagaagaaggtgggcgacagagt
ggcgagtccttgtctagtacagccctgggaactcctgaaaggcgcaagggcagtttagct
gatgttgttgacaccttgaagcagaggaaaatggaagagctcatcaaaaacgagccggaa
gaaacccccagtattgaaaaactactctcaaaggactggaaagacaagcttcttgcaatg
ggatcggggaactttggcgaaataaaagggactcccgagagcttagctgagaaagaaagg
caactcatgggtatgatcaaccagctgaccagcctacgagagcagctgttggctgcccac
gatgagcagaagaaactagctgcctctcagattgagaaacagcgtcagcaaatggagctg
gccaagcagcaacaagaacagattgcaagacagcagcagcagcttctgcagcaacaacac
aaaatcaatttgctccagcaacagatccaggttcaaggtcagctgccgccattaatgatt
cccgtattccctcctgatcaacggacactggctgcagctgcccagcaaggattcctcctc
cctccaggcttcagctataaggctggatgtagtgacccttaccctgttcagctgatccca
actaccatggcagctgctgccgcagcaacaccaggcttaggcccactccaactgcagcag
ttatatgctgcccagctagctgcaatgcaggtatctccaggagggaagctgccaggcata
ccccaaggcaaccttggtgctgctgtatctcctaccagcattcacacagacaagagcaca
aacagcccaccacccaaaagcaaggatgaagtggcacagccactgaacctatcagctaaa
cccaagacctctgatggcaaatcacccacatcacccacctctccccatatgccagctctg
agaataaacagtggggcaggccccctcaaagcctctgtcccagcagcgttagctagtcct
tcagccagagttagcacaataggttacttaaatgaccatgatgctgtcaccaaggcaatc
caagaagctcggcaaatgaaggagcaacttcgacgggaacaacaggtgcttgatgggaag
gtggctgttgtgaatagtctgggtctcaataactgccgaacagaaaaggaaaaaacaaca
ctggagagtctgactcagcaactggcagttaaacagaatgaagaaggaaaatttagccat
gcaatgatggatttcaatctgagtggagattctgatggaagtgctggagtctcagagtca
agaatttatagggaatcccgagggcgtggtagcaatgaaccccacataaagcgtccaatg
aatgccttcatggtgtgggctaaagatgaacggagaaagatccttcaagcctttcctgac
atgcacaactccaacatcagcaagatattgggatctcgctggaaagctatgacaaaccta
gagaaacagccatattatgaggagcaagcccgtctcagcaagcagcacctggagaagtac
cctgactataagtacaagcccaggccaaagcgcacctgcctggtggatggcaaaaagctg
cgcattggtgaatacaaggcaatcatgcgcaacaggcggcaggaaatgcggcagtacttc
aatgttgggcaacaagcacagatccccattgccactgctggtgttgtgtaccctggagcc
atcgccatggctgggatgccctcccctcacctgccctcggagcactcaagcgtgtctagc
agcccagagcctgggatgcctgttatccagagcacttacggtgtgaaaggagaggagcca
catatcaaagaagagatacaggccgaggacatcaatggagaaatttatgatgagtacgac
gaggaagaggatgatccagatgtagattatgggagtgacagtgaaaaccatattgcagga
caagccaactga
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