Pan paniscus (bonobo): 100996114
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Entry
100996114 CDS
T02283
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X4
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03082
ATP-dependent chromatin remodeling
pps03250
Viral life cycle - HIV-1
pps04714
Thermogenesis
pps05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100996114 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100996114 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100996114 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100996114 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pps01009
]
100996114 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pps03021
]
100996114 (SMARCB1)
03036 Chromosome and associated proteins [BR:
pps03036
]
100996114 (SMARCB1)
Protein phosphatases and associated proteins [BR:
pps01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100996114 (SMARCB1)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100996114 (SMARCB1)
SWI/SNF complex
100996114 (SMARCB1)
Chromosome and associated proteins [BR:
pps03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100996114 (SMARCB1)
PBAF complex
100996114 (SMARCB1)
SWI/SNF complex
100996114 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
100996114
NCBI-ProteinID:
XP_003804674
Ensembl:
ENSPPAG00000028391
LinkDB
All DBs
Position
23:33515250..33565294
Genome browser
AA seq
376 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNS
QWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPI
RLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYP
TDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVT
TIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQD
RNTRRMRRLANTAPAW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtgaagttccagctggag
gacgacggcgagttctacatgatcggctccgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactctggaggcgactagccactgtggaagagagg
aagaaaatagttgcatcgtcacatgatcatggatacacgactctagccaccagtgtgacc
ctgttaaaagcctcggaagtggaagagattctggatggcaacgatgagaagtacaaggct
gtgtccatcagcacagagccccccacctacctcagggaacagaaggccaagaggaacagc
cagtgggtacccaccctgcccaacagctcccaccacttagatgccgtgccatgctccacg
accatcaacaggaaccgcatgggccgagacaagaagagaaccttccccctttgctttgat
gaccatgacccagctgtgatccatgagaacgcatctcagcccgaggtgctggtccccatc
cggctggacatggagatcgatgggcagaagctgcgagacgccttcacctggaacatgaat
gagaagttgatgacgcctgagatgttttcagaaatcctctgtgacgatctggatttgaac
ccgctgacgtttgtgccagccatcgcctctgccatcagacagcagatcgagtcctacccc
acggacagcatcctggaggaccagtcagaccagcgcgtcatcatcaagctgaacatccat
gtgggaaacatttccctggtggaccagtttgagtgggacatgtcagagaaggagaactca
ccagagaagtttgccctgaagctgtgctcggagctggggttgggcggggagtttgtcacc
accatcgcatacagcatccggggacagctgagctggcatcagaagacctacgccttcagc
gagaaccctctgcccacagtggagattgccatccggaacacgggcgatgcggaccagtgg
tgcccactgctggagactctgacagacgctgagatggagaagaagatccgcgaccaggac
aggaacacgaggcggatgaggcgccttgccaacacggccccggcctggtaa
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integrated database retrieval system
