Pan paniscus (bonobo): 117980873
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Entry
117980873 CDS
T02283
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03430
Mismatch repair
pps03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117980873
03460 Fanconi anemia pathway
117980873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pps03400
]
117980873
DNA repair and recombination proteins [BR:
pps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117980873
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMS2CL
MutL_C
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
117980873
NCBI-ProteinID:
XP_063461687
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Position
6:complement(10910834..10944729)
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AA seq
580 aa
AA seq
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MNTLQLQSLIPFVQLPPSDSMCEEYGLGCSDALHNLFYISGFISQCARGVGRSSTDRQFF
FVNRCPCDPAKVCRLVNDVYRMYNRHQYPFVVLNISVDSGNLIKMHAADLEKPMVEKQDQ
SPSLRTGEEKKDVSISRLREAFSLRHTTENKPHSPKTPEPRRSPLGQKRGMLSSSTSDAI
SDRGVLRPQKEAASSSQGPSDPTDRAEVEKDSGHGSTSVDSEGFSIPDTGSHCSSECVAS
TPGDRGSQEHVDSQEKAPETDDCFSDVDCHSNQEDTGCKFRVLPQPTNLTSPNTKCFKKE
EILSNSDIRQKLVNTQNVSASQVDVAVKINKKVVPLNFSXSSLAKRIKQLHHEAQQSEGE
QNYRKFRARICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHA
TDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVT
ERAKLISFPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQMFASRACRKSVMIGTAL
NTSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLGVISQN
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattgcagttgcaaagcctcattccttttgttcagctgccccctagtgactcc
atgtgtgaggagtatggtctgggctgttcggatgctctgcataatcttttttacatctca
ggtttcatttcacaatgcgcacgtggagttggaaggagttcaacagacagacagtttttc
tttgtcaaccggtgtccttgtgacccagcaaaggtctgcagactcgtgaatgacgtctac
cgcatgtataatcgacaccagtatccatttgttgttcttaacatttctgttgattcaggt
aacttaataaaaatgcatgcagcggatttggaaaagcccatggtagaaaagcaggatcaa
tccccttcattaaggactggagaagaaaaaaaggacgtgtccatttccagactgcgagag
gccttttctcttcgtcacacaacagagaacaagcctcacagcccaaagactccagaacca
agaaggagccctctaggacagaaaaggggtatgctgtcttctagcacttcagatgccatc
tctgacagaggcgtcctgagacctcagaaagaggcagcgagttccagtcagggacccagt
gaccctacggacagagcggaggtggagaaggactcggggcacggcagcacttccgtggat
tctgaggggttcagcatcccagacacgggcagtcactgcagcagcgagtgtgtggccagc
accccaggggacaggggctcgcaggaacatgtggactctcaggagaaagcgcctgaaact
gacgactgtttttcagatgtggactgccattcaaaccaggaagataccgggtgtaaattt
cgagttttgcctcagccaactaatctcacatccccaaacacaaagtgttttaagaaagaa
gaaattctttccaattctgacattcgtcaaaagttagtaaatactcagaacgtgtcagcc
tctcaggttgatgtagctgtgaaaattaataagaaagttgtgcccctgaacttttctnng
agttctttagctaaacgaataaagcagttacatcatgaagcacagcaaagtgaaggggaa
cagaattacaggaagtttagggcaaggatttgtcctggagaaaatcaagcagccgaagat
gaactaagaaaagagataagtaaaacgatgtttgcagaaatggaaatcattggtcagttt
aacctgggatttataataaccaaactgaatgaggatatcttcatagtggaccagcatgcc
acggacgagaagtataacttcgagatgctgcagcagcacaccgtgctccaggggcagagg
ctcatagcacctcagactctcaacttaactgctgttaatgaagctgttctgatagaaaat
ctggaaatatttagaaagaatggctttgattttgttatcgatgaaaatgctccagtcact
gaaagggctaaactgatttcctttccaactagtaaaaactggaccttcggaccccaggac
gtcgatgaactgatcttcatgctgagcgacagccctggggtcatgtgccggccttcccga
gtcaagcagatgtttgcctccagagcctgccggaagtcggtgatgattgggactgctctt
aacacaagtgagatgaagaaactgatcacccacatgggggagatggaccacccctggaac
tgtccccatggaaggccaaccatgagacacatcgccaacctgggtgtcatttctcagaac
tga
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