Pan paniscus (bonobo): 129394383
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Entry
129394383 CDS
T02283
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129394383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
129394383
03009 Ribosome biogenesis [BR:
pps03009
]
129394383
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129394383
Ribosome biogenesis [BR:
pps03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
129394383
Pre-60S particles
129394383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_EF3_N
HEAT_2
Vac14_Fab1_bd
Cnd1
HEAT_GCN1
TPR_DNAAF5
HEAT_MROH2B_C
TOR1L1_N
Arm
Adaptin_N
MMS19_C
PDS5
VPS15-like_hel
CLASP_N
Motif
Other DBs
NCBI-GeneID:
129394383
NCBI-ProteinID:
XP_054957210
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All DBs
Position
19:complement(55492876..55497956)
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AA seq
471 aa
AA seq
DB search
MLQRTQDQEENVALEACEFWLTLAEQQVCKDVFVRHLPRLIPVLVNGMKYSDIDIILPKG
DVEEDEMIPDSEQDIWPRFHRSRTVAQQHDEDGIEEEDDDDDDNEIDDDDTISDWNLRKC
SVAALDVLANVHHDELLPYILPLLKELLFHHEWVVKELAILGLGTVAEGCMQGMIPCLPE
LIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKSLMTELLKRILDSNKRVPE
AACSAFATLEEEACTELVAYLAYILDTLVFAFSKYQHKNLLILYNARGTLADSVGHHLNK
PEYIQMRMPPLIQKRNMLKDEDKDLFPLPECPFSVATVLQSGFLPYCEPMCQHWVNLVQK
TLAQAMLSNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLTYQCMQD
KMPEVRQSSFALLIDLTKACFQHIKPCVADFMPILGTNLTAEFISVCNNDT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgctacagaggactcaagatcaagaagaaaatgtggctttagaagcctgtgaattttgg
ctaactttagctgaacagcaagtgtgcaaagatgtattcgtaaggcatcttcccaggttg
attcctgtgttagtgaatggcatgaagtactcagatatagatattatcctacctaagggt
gatgttgaagaagacgaaatgattcctgatagtgaacaggatatatggccacgttttcac
cgatcaaggacagtggctcagcagcatgatgaagatggaattgaagaggaagatgatgat
gatgatgataatgaaattgatgatgatgatacaatttctgactggaatctaaggaaatgt
tctgttgctgccctagatgttcttgcaaacgtgcatcatgatgaactgctgccatatata
ttgccccttttgaaagaattactttttcatcatgaatgggttgttaaagaattagccatc
ttgggtttaggaacagttgctgaaggttgcatgcagggcatgattccttgcttgcctgag
cttattcctcaccttattcagtgcctctctgataagaaggctcttgtccgttccataaca
tgctggactcttagccgctatgcacactgggtagtcagccagccaccagacacgtacctg
aagtcattaatgacagagttgctaaaacgcatcctggatagcaacaagagagtaccagaa
gctgcctgcagtgcctttgctaccctagaagaggaggcttgtacagaacttgttgcttac
cttgcttatatacttgataccctggtctttgcatttagtaaataccagcataagaacctg
ctcattctttacaatgccagagggacattagcagattcagtaggacatcatttaaacaaa
ccagaatatattcaaatgcgaatgcctccactgatccagaaacggaacatgttaaaggat
gaagataaagatcttttccctttacctgagtgtccattttcagttgccacagtgctgcag
tctggcttccttccatactgtgaacctatgtgtcagcattgggtaaacctagtacagaag
actcttgcacaagccatgctaagcaatgctcaaccagatcaatatgaagctccagataaa
gattttatgatagtggctcttgatttactgagtggcctggctgaaggacttggaggcaat
attgaacaactggtagcccgaagtaacatcctaacactaacatatcagtgcatgcaggat
aaaatgccggaagttcgacagagttcttttgccctgttaattgacctcacaaaagcttgc
tttcagcatattaagccttgtgtagctgattttatgccaatattgggaaccaacctaact
gcagaattcatttcagtctgcaacaatgacacatga
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