KEGG   Podospora pseudoanserina: QC764_100210
Entry
QC764_100210      CDS       T09816                                 
Symbol
RTC1
Name
(RefSeq) SEA (Seh1-associated) complex subunit
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
ppsa  Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:ppsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppsa04131]
    QC764_100210 (RTC1)
Membrane trafficking [BR:ppsa04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    QC764_100210 (RTC1)
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_IFT140_1st MIOS_WD40 WD40_Gbeta Beta-prop_DCAF4 Beta-prop_RIG_1st Beta-prop_EML Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_2nd Beta-prop_VPS8 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_WDR41 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 87962103
NCBI-ProteinID: XP_062804125
LinkDB
Position
1:247601..252063
AA seq 1362 aa
MHHNQGKIMRKLLSKHATDSHESTASATVTSSPSNNYGSIAPQNVSYKTGAPLSCLDQSP
DGRSAVLASHHVLKLIKLDGGLRVQEEVDLRAILTSQPAHRNNVPTGAVADQLSIQDVKW
GSVINREVLFTACTSGIIFQYDVNRAKATRVGAPLEFIQMREDSRQVNSLDLNPHHSSWL
LSGSQDGLLRCFDVRTPVNTRTWPTYRALQSFKSHADGVRHVQWSPKDGFLFACGTEQGM
VLKWDMRKPSSPILRINAHEKACTSIAWHQDGTHLVSAGLDSKCNIWDMSKTDKRQKPKY
VISTPAPVGSLAWRPGQWSATAQGKRASQLAVSYDESGMKRFGMNSVHIWDLARPTMPYK
EIQRFEYAPNSILWHDQYLLWTAGRDGFHQCDVSFAPKVMDRQTMSAFAFSSQGEVAMCL
DERPMPTRPRPNIVHHDNASTHESPSYSSSPTTPRFSVSRSDSEDDAIGSFLGSRQPGNG
SRKRRASMRSANTLSTTPPVGPAMGETLSLEDTIEVTGTYQPNQAMAIGTYPGPTNAEVD
VYLSLNYLQAIHLELPYKPGGPSLPERMTTILDHFAKAAARVRLSRLSHTWMNLLFLIKL
LLERRAQYHLEFRMDKYQNSTIKKKDAARHRSLGQLRAEPPSFGIGGEASPRKMASLASF
DRVLHPRSLLSEELESTSNQPTPLARPVPDTQVIQIDDNGRKKLTPIIEPESFTLPPAAH
SRTLEPRPRLDSVPLSVTSHDSEATNASTEGYDFYDAEALNFREPGSPSRVRKPPVLRHD
SDDSFTRLFSVSDESRETTGLVRTSDSDTPSQVMREAIVAAIRRDQPSASGSGSEDGEYE
SRIRGKQIAAGSSPGRHPQRQLLQRTETDMTSYTAFTDEHHAITQTTTDSFESRFPSQTT
DGGFGMDSPVRQSGIEYPGQPQGLLSVEADLSPEDDLSPYIVETDYLHWPGDPSYPHLLW
SSNGLFGIGESLIQPEQQIAATLAYEVRKTARDAAAIVLLFKPLLAPDVLDSFQAAAILK
QHHQRLMKLQAFTEAALMRKMCMKGWPGGVLSNWGENHPNVISPAQRGVQVGLLCSSCRK
PREIDRSKGSNETIWMCGRCKASMAPCAVCQQRDIAPTPGSRDDTKEGDEEEPVLATWWI
CPGCGHGGHSSCLQLWHEGFENECSSTDPDILAEFQSDGYCPMDGCGHTCLPGKGRLETA
AARTEEVGRVAAREATRNATSMKASADTESIVGGLQGHHHPHPPHQYRTTGSGKILDDQH
HQYPHYPSQGVNISNDEHSVPQSRAVESVRESLASMGISSHSHGGSSSTRHSTPGASILS
SSPGSKSAMMAAADRASGGHGGGDGRERRKSVKFVAQEDTKH
NT seq 4089 nt   +upstreamnt  +downstreamnt
atgcaccacaaccagggcaaaatcatgcgcaagctactcagcaaacatgcgacagactcg
cacgagtccacggcctcggcgactgtcaccagctctccctccaataactacggatcaatc
gccccccaaaatgtcagctacaagacgggtgcacccctgtcctgcctggaccagtcgcct
gacgggagaagcgctgtcctggccagccaccatgtgctgaagctgatcaagctcgacggt
ggacttcgggtacaagaggaagtcgacttgcgcgcaatcctgacctcgcagcctgcgcac
cgtaacaatgtccctactggtgccgtggccgaccagttgtctattcaggatgtcaagtgg
gggagtgttatcaacagggaggtcctcttcacggcctgcaccagcggcatcatctttcag
tacgatgtgaaccgggccaaggctacaagggtcggcgcgcctcttgaattcatccaaatg
cgggaggactctcgccaggtcaactctctcgacttgaatccccatcactcttcatggctc
ttgtctggaagtcaggacggtctgttgcggtgcttcgatgtgcgcacacctgttaacacc
aggacgtggccaacataccgtgctctccagtccttcaagtcacacgcggatggtgtcagg
catgtccagtggtcgcccaaggacggcttcctattcgcctgcgggacagagcaagggatg
gtgctgaagtgggacatgcggaaaccaagctcccctattctgaggatcaatgcccacgaa
aaggcctgtacctcgattgcatggcaccaggatggcacccatcttgtcagtgctgggctc
gacagcaagtgcaacatctgggacatgtccaagacggacaagagacagaagccaaagtat
gttatatcaacacctgcccccgttggctcactggcatggcggcctggccaatggtcggca
acagcacagggcaagcgggcctcgcagctcgcagtgtcctacgatgaaagcggcatgaag
cggtttggcatgaattcagttcacatctgggacctcgctcgccctaccatgccctacaaa
gaaatccagaggttcgaatacgcacccaactccattctctggcacgaccaatacctcctc
tggaccgctggccgtgatggcttccaccagtgtgacgtctcctttgcgcccaaggtcatg
gaccgccaaacaatgtcggcctttgccttttcctcacaaggcgaggtcgccatgtgcttg
gacgagcgacctatgcccacccgcccccgacccaacattgttcaccatgacaatgcttcc
actcacgaatcaccatcttacagctcgagccccactactccaagattcagcgtcagtcgc
agtgattccgaggatgacgctattggcagcttcttgggctccaggcagccaggcaacggc
agccgcaaacgcagagcgagcatgcgatctgcgaataccctcagcaccacaccacctgtt
gggcctgccatgggtgagacactgtcactggaagacacgatcgaagtgacgggtacatac
cagccgaatcaagccatggccatcggcacatatccgggccctaccaatgctgaggtagat
gtctatctcagcctcaactacctccaggccatccatttagagctaccttacaaacccggt
gggccgtctttgccagagcggatgacgaccatcttggaccactttgccaaagctgccgca
agagttaggctttcaagactgtcacacacctggatgaacctcctcttcctgatcaagctt
ctcctcgagcgtcgcgcacagtaccacctcgagtttcggatggacaagtaccaaaattca
accatcaaaaagaaagatgcggctagacatcggtcactgggtcagctccgtgccgaacca
cccagctttgggattggcggggaagcaagcccacggaagatggcctctctggcaagtttc
gaccgggtccttcatccacgatcacttttatctgaagagctcgaaagcacctccaatcaa
cctaccccgctggctcgcccagttcccgatacacaagttatccagattgatgacaatggg
cgcaagaagctcacacccatcatcgaaccagagagcttcacgctgcctccggcggcccat
tctcgcaccctcgagcccaggccccgactggattcagtgcccctgtcggtcaccagtcat
gacagtgaggccaccaatgccagcaccgagggctacgacttttatgacgccgaggccctc
aactttcgagaacccggctcgcccagccgtgttcgaaagccgcccgttttgcgacatgat
tcggatgatagtttcacccgactcttttccgtctcggacgaaagcagggagacgactggc
cttgtccggacctcggacagcgacactccgtcgcaggtcatgagggaggccattgtggcc
gccattcggcgcgaccagccaagtgccagcggaagcggaagcgaagacggcgaatacgaa
agccgcatccgtggcaaacagatcgccgccggaagctcgcctggccgtcatccacagcgg
caattgcttcagcgtaccgagactgacatgacatcgtacactgcctttaccgatgagcac
cacgccatcacccagaccaccaccgacagcttcgagtcacgcttcccgtcacagacaacg
gatggcggctttggcatggactctccagtccgacagagcggtattgagtatcctgggcag
ccacaggggctgctgtctgtcgaggctgacttgtcccccgaagatgatttgtccccctat
attgtagagacggattacctccactggcccggcgacccaagctacccacacttgctctgg
tcctcgaatggattatttgggattggtgaatccctaatccaacccgagcagcagattgca
gccacgctggcctacgaagttcgcaagacagcccgtgacgcggccgccatcgtcctgctg
ttcaagcccctacttgcgcctgatgtccttgactcttttcaagcggcagctatcctcaag
caacaccaccagcgtctgatgaagctccaggcttttaccgaggcggccctcatgcgcaaa
atgtgtatgaagggatggcctggaggtgtgctgtccaactggggcgaaaaccacccgaat
gtcattagcccggctcaacgaggtgtccaggttggcctcctttgttccagctgccggaag
ccgagagagattgaccgatccaaggggtcaaatgagaccatctggatgtgtggacgttgt
aaggccagcatggccccttgtgctgtctgtcaacagcgtgatatcgctcccacgcccggc
tcgcgggacgatacgaaggaaggtgatgaggaggagccggtgttggctacctggtggatt
tgtcctggctgcggtcacggtggacattctagctgcctccagctttggcatgaagggttt
gagaacgaatgcagttccaccgacccggatattcttgccgagttccagagtgatggttat
tgtcccatggatgggtgtggacacacatgtctgcccggaaagggaaggctcgagacagct
gcggccaggacagaagaggttggtcgggtggcagcgagggaggcaacgcgaaatgcaacc
agcatgaaggcgtctgcagacacggagagcatagtgggcggtctccaaggccaccatcat
cctcacccgcctcaccagtaccgcaccacgggaagcggcaagatcttggatgaccagcac
caccagtaccctcactatccttcccagggggtcaatatttcgaatgatgagcacagcgta
ccccaaagcagggcggtagagagcgttagggagtctctggccagcatgggcatctcttct
cattctcatggcggcagcagcagcacaagacacagcacgccaggagccagcatcttgagc
tcgagcccgggcagcaagtcggcaatgatggctgctgctgatagggcgagtggcggtcac
ggtggtggggatggcagggagcggaggaagagcgtcaagtttgttgcgcaggaggatacc
aagcattga

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