Podospora pseudoanserina: QC764_104090
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Entry
QC764_104090 CDS
T09816
Symbol
YTH1
Name
(RefSeq) RNA-binding component of cleavage and polyadenylation factor
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
QC764_104090 (YTH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsa03021
]
QC764_104090 (YTH1)
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_104090 (YTH1)
Transcription machinery [BR:
ppsa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
QC764_104090 (YTH1)
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
QC764_104090 (YTH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
87962515
NCBI-ProteinID:
XP_062804529
LinkDB
All DBs
Position
1:1474046..1474813
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AA seq
255 aa
AA seq
DB search
MAFLPPPAQQLLTHTPTPYTFTFTPFLQKTYQHSLPPPSSNLSSGDQQQSQPNNNNTGGF
GSLVCKHWLRGLCKKGLTCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPSSKLP
PCPHYDRGFCPLGPKCDKRHLKRNICLYYLAGFCPDGKQCRQGAHPRWTRDELMEKPTMK
VEKTAEELEREEQERERHRERERERDMERRAERDRERGGDGDRHDRGHEKGGRFGRGGRG
RWGGKRGGYRGRGGH
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcctcccgcccccagcccaacaactcctaacccacacacccaccccctacacc
ttcaccttcacccccttcctccaaaaaacctaccaacactccctccccccacccagcagc
aacctctcctcaggcgaccaacaacaatcccaacccaacaacaacaacaccggcggcttc
ggttccctagtctgcaaacactggctccgcggcctctgcaaaaaaggcctaacctgcgag
ttcctccacgagtacaacctccgcaagatgcccgaatgcaacttcttcgtccgcaacggc
tactgctccaacggggacgagtgcctctacctccacatcgatccctcttccaaacttccc
ccctgcccccactacgaccgcgggttttgccccttggggccaaaatgcgacaagagacat
ttaaagagaaacatatgtctttactacctcgcggggttctgcccggacgggaagcagtgc
aggcagggggcgcatccaaggtggacgagggatgagctgatggagaagcctactatgaag
gtggagaagacggcggaggagctggagcgggaggagcaggagagggagaggcatagggag
cgggagagggagagggatatggaacggcgggcggagagggatagggagcggggtggggat
ggggataggcatgatagggggcatgaaaaggggggcaggtttgggaggggggggaggggg
aggtggggtgggaagaggggggggtatagagggagagggggtcattag
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integrated database retrieval system
