Podospora pseudoanserina: QC764_106550
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Entry
QC764_106550 CDS
T09816
Symbol
VPS8
Name
(RefSeq) Vacuolar protein sorting-associated protein 8
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa04138
Autophagy - yeast
ppsa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
QC764_106550 (VPS8)
04148 Efferocytosis
QC764_106550 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsa04131
]
QC764_106550 (VPS8)
Membrane trafficking [BR:
ppsa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
QC764_106550 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
TPR_VPS8_2
VPS8_N
Beta-prop_EML
zf-RING_Vps41
Clathrin
zf_RING_Vps8_fungal
zf-RING_UBOX
TPR_Vps41
zf-RING_5
zf-RING_2
Beta-prop_HPS5
PHD_NSD
zf-rbx1
zf_RING_Vps8
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
zf-C3HC4
zf-RING_11
zf-Nse
Beta-prop_WDR3_1st
PHD
Beta-prop_EML_2
WD40
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
87962768
NCBI-ProteinID:
XP_062804809
LinkDB
All DBs
Position
1:2314205..2319844
Genome browser
AA seq
1631 aa
AA seq
DB search
MSSSQAQGSNGPGDNMADIPELAPEADDHRLGSSSSDEETIRGERDEDYVADAAILEEEE
ENWPADVPIPTVEVDTSASIPNHYRGIVGASQEATSEDGSTDAIPRLAASPMGSNLSIPD
DTPSAQGSVVSSMGSSVLPSFAHRPGMSPTPSFRPFDQRFQSRIASPHLSSPRPSSPAFL
AGHSRTVSVSSQFLLDSGETETPSPPWEVVRWTKLRKLNSQAFSEAGKRNFGTPTCLAVT
ANIVMGTSKGIILVFDYNQNLKLIIGPGTKAVESGPITSIAISADHSTIAGGHSNGNIFT
WDTTRAARPFLSIPHLDSTQVQRRTADGHVSNVAITHLGFLGTRHTALVSADDRGMAFSH
LATRGTGALGRTVKTTRILGRYPDSKPPVGKTLKPSTVLGFSSCPLGNVEMATDGMGLTA
MLTPYLLVIVSTTPIAQTQHKSARPKEVAAHSAMTGCLAWFPAVKLKVPDPVTGSQISKV
KLVYCWSNVLTVLDVDEIPEDDKEKLPSLKFRARSRWTCEESIAAVQWLSRSVLTVLTIS
QRLIVLEDRSMRMTEAFDLMGKHIYHADLFSKQLNPLVEQLDEDDDSMHGVVADAFYMSF
KAYKSRLFLLGFNDVSIGALSNWADRLIALMESGDYVGAIQLATSYYTGDANKLTVGLPE
DAKLRHSMVQDKLMEIMSASLKYAFGQRQKRKDSVTDAHLQELAETCFVACQSVGDEDFV
FDEMWEWYEDAEVEGIFLETLEPYILDGSITTVPPVVVKGMVTHFVSKGLESRLEELICH
LNTATLDLDQITLLCKQHSLYDALLYVWNQALQDFITPLLDLLALLVPLMQNGRYSGSAN
PIEDDVYGVNALKIFPYLSYVLTGRVYPTGEALSEEIAQRAKAELYWLLFSGKSITWPKG
SNKRLLTKPSQSQEPSFPYLRLILNFDAPSFLSALNEAFEDSFLNDSPEKQAATGSRPRD
LPEEQIFGLTVDRQYIVSILMEIMNSTDYETTDTIYLDMFIARNLPKYPQYLLFPGSTLT
KVLAGLCKFPGRDLAEDAQLSAEYLLSVYHPPDVNDLIPLFKEAGFYRILKRIYKNDKQY
GKLIETYFDDPEDQEAVFSCIEVCLRPQAGLTRRQIQDVHQVIKRHAAQFVEIDPPMAAK
TIAKVAPELHHDVLQASGEQPGLQYSYLKAILEPQTEQRRTGSPDRDMVEQYLRLMCRFD
PAHVSDYVGLVQSTNLRLENLLPTMEETGVIDAAVILMAKEGQAQEAMGRLVKHLETLES
ALQGLLAGSEPESTTEQLHQSVEELMEALRRYILVGIWLCQGQTETVREANAGRRRQKPT
LDDALSSDEALWLDLIDIAVRITKQISTALRLSPAETPSENEKPNLPLGDNDKITTLLRS
LVQNTFTALLTCTSTPSPSSTTTAGMGSNLSFLRILRAFLTRAAASSPNLADLRSVLSSI
FAAYAYEESILRLSNRLLERSLFVSVNEAVALRQRGWRPRGSTCEACRRRVWGPGVAGNV
FEAWEEKQTVEEKKRKLRKALISPNGDVGEDGTGGDEEEAYVGKGKGKGKAPSPRLRQED
GAVGDGDVQTAQDPREGRSDEAGAPRRREQPPLGPLVLLACRHIYHKSCLEELLAKDGQV
KENEYRCPIDG
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgagtcaagcacagggcagcaatggcccgggagacaatatggccgacattcca
gaactggccccagaagcagatgatcacaggctagggtcgagctctagcgatgaggagaca
ataagaggggagcgtgacgaagactatgttgctgatgccgccatactggaggaagaggaa
gagaactggccagctgacgttccaatacccactgtcgaggtcgatacctctgcttccata
cccaaccactatcgtggaattgttggagcttcacaggaggctacttcggaagatgggtcg
accgatgctataccgcggttggcggcaagccctatgggttccaacctttcaattccagat
gatactccgtctgctcagggctccgtcgtttcctcgatgggtagcagtgtcttgccctcc
ttcgctcaccgacctggtatgagcccaacgccatctttcaggccgtttgaccagagattc
caatctcgtattgcctcgccacacctaagctctccccgaccgtcctcacctgcctttctt
gctggacatagccgaacagtgtctgtgagcagtcagtttctactcgattcgggtgaaaca
gagacgccgtctccgccatgggaggttgtgaggtggacgaagctcagaaagctaaatagc
caggctttctcggaggcaggaaagagaaattttggaactccaacctgtcttgccgtcaca
gcaaatatcgtgatggggacatcaaagggcataatcctggtttttgactataaccaaaat
ctcaagttgatcattggtccaggaacaaaagctgttgagtcgggtcctatcacatcgatt
gccatttcggcagaccatagcactatagctggtgggcactctaacggcaatatctttacc
tgggacaccacccgagcggcgagaccgtttcttagcataccccatttggactcaacacaa
gtccaacgcagaacggccgacggtcatgtctccaatgttgctatcactcacttaggattt
ctcggaacacgccacacagcactcgtttcggccgacgacagaggaatggccttttcacat
ctcgcaacgcggggcacaggagcactgggaaggacagtgaagaccactcgcattctcggg
cgctatccagactcaaaaccacctgttggaaaaaccctcaagcccagcactgtactaggg
ttttcctcatgtccccttggtaatgtcgagatggctactgacggtatgggcctcacggcg
atgctcaccccctatttgctcgtcattgtctccacaacccctatcgcgcaaactcaacac
aaatccgcccgtccaaaagaggttgcagcacacagtgccatgaccgggtgcctagcttgg
tttccagctgtgaagctgaaggtgccggaccctgttactggaagtcaaatttccaaagtg
aaattggtgtactgctggtcaaatgtcctcactgtactagatgtggatgagataccagaa
gatgacaaagaaaaactcccaagtctcaaattcagagcacggagccgatggacgtgtgag
gaatcgatcgcggctgtccagtggctcagcagatcagttctgacggttctcacgatatcc
caacggctgatcgtgctcgaagatcgaagcatgcgcatgacggaggcttttgacttgatg
ggcaagcacatctatcatgcagatcttttttcaaaacagctgaacccactggtggaacaa
ctggatgaagatgacgactcgatgcatggtgtcgttgctgacgcgttctacatgagtttc
aaggcgtataaaagccgcctgtttctcctgggattcaatgatgtttcgataggcgctctg
tccaactgggctgatcgcttgatcgcgttgatggaatctggggactatgtgggggccatc
caacttgccacgtcctactacacaggtgatgctaataagctcaccgtcggacttccagaa
gatgcaaaactcagacactctatggtccaggacaagctgatggaaatcatgagcgcctcg
ctcaagtatgcatttgggcagagacagaagcggaaagacagcgttacagacgctcatctg
caagagctggccgaaacctgctttgtggcttgccaaagtgtcggggacgaggacttcgtc
tttgacgagatgtgggaatggtacgaagatgccgaggtcgaaggcattttccttgagact
ttggagccatacatcctcgatggatctattacgacggtccctccagttgtggtcaaaggc
atggtcacccactttgtgagcaaagggctcgaaagccgcctggaggaactgatatgccat
ctaaacaccgcgactctcgatttggaccaaatcaccctactttgcaaacaacacagcctt
tacgacgccctcctatatgtctggaatcaagcccttcaagatttcattacgcccctcctc
gatttgctggctttattggtaccattgatgcaaaacggccgatattcaggctcagcaaac
ccgatcgaggatgatgtttatggggtcaatgcccttaagatcttcccatatctttcatat
gtcctcacgggacgggtgtacccgactggtgaggccctgtcagaagagatcgcgcagagg
gcaaaggctgagctttattggctactcttctctggcaaaagcattacctggcctaagggc
agcaacaagcgactcctcacgaagccttctcagtcgcaggagccgtcgtttccctaccta
cgattgatccttaactttgatgcgcccagctttctgagtgccctcaatgaagcgtttgaa
gattccttcctcaacgattcgcccgagaagcaggcggcaaccggcagccgaccacgagat
ctaccagaagagcaaatcttcgggttgactgtagacagacagtacattgtctccatcctg
atggagatcatgaactcgaccgactacgaaacgaccgacacgatctaccttgacatgttt
attgcgagaaacctccccaaatacccacaatatctgctgtttccaggctcaactcttacc
aaagtgctcgcgggactctgcaagtttcccggccgagacctggccgaggatgctcagctg
agtgcggaatacctgctttcggtataccatccaccagatgtcaatgacttgattcccctt
ttcaaggaagctggattctatcgcattttgaagcgcatctacaagaacgacaagcagtat
gggaaactcattgagacttattttgacgatcccgaagaccaagaagctgtgtttagctgc
attgaggtctgcttacgaccgcaagcgggccttacacggcggcaaatacaggatgttcac
caagtcatcaaacggcacgcggctcagtttgtcgagattgaccctcccatggcagccaaa
accattgcaaaggttgcgcccgagctgcatcatgacgtccttcaagcatctggtgagcaa
ccgggactgcaatattcgtatctcaaggccatcctggagccacagactgaacaacgtcgt
actgggtcaccagatcgggatatggttgagcagtatctgcggctgatgtgcaggtttgat
ccagcacatgtgtctgactatgttgggctggttcagtctaccaatctacggcttgaaaac
ttgcttccaacgatggaggagacaggcgtgattgacgcggctgtcatacttatggccaag
gaaggtcaggctcaggaggcaatgggtcggttggttaagcacctcgaaacactagaatct
gctctccagggtctgcttgcaggttctgaacctgaatcgaccactgagcagcttcaccag
tctgtcgaggagctgatggaggccttgaggaggtacatcctagtcggcatctggctttgc
cagggacagacggagactgtgcgggaagccaatgctggtcgtcgacggcagaagcctact
cttgacgatgcactgtcttctgatgaggctctctggcttgatctgattgatatcgcggtg
cggatcaccaagcagatctctacggccctccggttgtctccggcagaaactccctccgag
aacgagaagcccaatctaccattaggcgataacgacaaaatcaccactcttctccgctct
ctggtgcaaaacacttttaccgcactgctcacatgtacttcaaccccatcaccttcctcg
accacaactgccggcatgggcagcaacctgtcctttctccgaatcctcagggcgttcctc
acacgtgcggctgcctcctctcccaacttggccgaccttcgctccgtcttgtcgtccatt
tttgcggcgtatgcgtatgaagagtcgatcctgcggctgtccaaccggcttcttgaacgg
agtttgttcgtcagtgtcaacgaggcggtcgcgctccggcagcgaggatggcgaccacga
ggctcaacctgcgaggcttgccgtcggagagtgtggggtccgggggtggctggaaatgtg
tttgaagcttgggaggagaagcaaacggtggaagagaagaagaggaaattgagaaaggcc
ctgatatcaccgaatggtgatgtcggtgaggatgggacaggtggtgacgaggaagaggct
tatgttggcaagggcaaagggaaaggaaaggcacctagtcccaggttaagacaggaagat
ggggcggtcggtgatggcgatgttcagacagctcaggatccccgagagggacggtctgat
gaggctggggctcctaggaggagggagcagccaccgttggggccgttggtcttgcttgcg
tgtagacatatttaccacaagagctgcttggaggagctgttggcgaaggatgggcaggta
aaggaaaatgagtatagatgtcctattgacgggtag
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integrated database retrieval system
