Podospora pseudoanserina: QC764_110440
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Entry
QC764_110440 CDS
T09816
Symbol
TIF1
Name
(RefSeq) translation initiation factor eIF4A
KO
K03257
translation initiation factor 4A
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_110440 (TIF1)
03012 Translation factors [BR:
ppsa03012
]
QC764_110440 (TIF1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsa04147
]
QC764_110440 (TIF1)
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
QC764_110440 (TIF1)
mRNA cycle factors
Stress granule specific factors
QC764_110440 (TIF1)
Translation factors [BR:
ppsa03012
]
Eukaryotic type
Initiation factors
eIF-4
QC764_110440 (TIF1)
Exosome [BR:
ppsa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QC764_110440 (TIF1)
Exosomal proteins of bladder cancer cells
QC764_110440 (TIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
CMS1
IL17R_D_N
Flavi_DEAD
UvrD-helicase
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
87963178
NCBI-ProteinID:
XP_062805248
LinkDB
All DBs
Position
1:3656460..3658997
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AA seq
396 aa
AA seq
DB search
MADKGLEDVPEGQIESNYDETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKG
HDVIAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVAIGDFMNI
ECHACIGGTSVRDDMKALGEGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSR
GFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFY
IAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQ
RDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG
VAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagggtctcgaggacgtccccgagggacagatcgagtctaactacgatgag
accgtcgactctttcgatgagatgaacctcaagtcggagctgctccgcggtatctatgcc
tacggtttcgagcgcccctctgctattcagcagcgtgctatcatgcccgtcatcaagggc
catgatgttatcgcccaggctcagtccggtactggcaagactgccaccttctctatctcg
gtcctccagaagatcgacacctccctcaagcagtgccaggccctcattctcgcccccacc
cgtgagttggcccagcagattcagaaggtcgttgtcgccattggcgacttcatgaacatt
gagtgccacgcctgcattggtggtaccagcgtccgagacgatatgaaggctcttggcgag
ggcccccaggtggttgtcggtacccccggtcgtgtccacgacatgattcagcgtcgtttc
cttaagacggactccatgaagatgtttgtcctcgacgaggccgatgagatgttgtctcgt
ggtttcaccgagcagatctacgacatcttccagctccttccccagagcacccaggtcgtc
cttctctcggccaccatgccccaggacgtccttgaggtcaccaccaagttcatgcgcgac
cccgtccgcatcttggtcaagaaggacgagcttacccttgaaggtatcaagcagttctac
atcgccgtcgagaaggaggagtggaagctcgataccctctccgatttgtatgagactgtc
accatcacccaggccgtcatcttctgcaacacccgccgcaaggtcgactggcttaccgac
aagctcactgcccgtgatttcaccgtctcggccatgcacggtgacatggaccaggcccag
cgtgacctcatcatgaaggagttccgctccggctcctctcgtgtcctcatcgccactgac
cttttggcccgtggtattgatgtccagcaggtttccctggtcatcaactacgatctcccc
gccaaccgtgagaactacattcatcgcattggtcgtggtggtcgtttcggtcgcaagggt
gttgcgatcaactttgtcactgctgatgatgtccgcatgatgcgcgagattgagcagttc
tacagcacccagattgaggagatgccgatgaacgtggccgacctcatctaa
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