Podospora pseudoanserina: QC764_112110 Help Entry QC764_112110      CDS       T09816                                  Symbol PRP40 Name (RefSeq) U1 snRNP protein   KO K12821   pre-mRNA-processing factor 40 Organism ppsa  Podospora pseudoanserina Pathway ppsa03040   Spliceosome Brite KEGG Orthology (KO) [BR:ppsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     QC764_112110 (PRP40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ppsa03041]     QC764_112110 (PRP40) Spliceosome [BR:ppsa03041]  Complex A   U1 snRNP components    U1 related factors     QC764_112110 (PRP40)  Complex B     QC764_112110 (PRP40) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  FF WW WW_TCERG1 WW_2 Motif Other DBs NCBI-GeneID:  87963336 NCBI-ProteinID:  XP_062805425 LinkDB All DBs Position 1:4188536..4191874 Genome browser AA seq 865 aa AA seqDB search MNGHFAPPGAPAVWTEHKTPDGRTYYYNILTKVTQWTKPEEMMTPAERALANQPWKEYTA EGGRKYWYNTETKQSSWEMPDVYKRALGAGDSAATTPTGPSASFGAAGGGSGHHGGSYDH HHQQRDHRDYRDHREPMGESRQLTYGRNIQAQAFVSPNNDPEYATAEEAEAAFVKLLRSS KVQPDWTWEQAIRAIVKDPQFRAIKDPRDRKAAFEKYCHDVVVQDKERAKERLTKLRADF ATMLRSHPEIKHYTRWKTARPMIEGETIFRSTNDENERRQLFEDYVSDLKRAHKEQQVTM RKSAMDGLIELLPTLSLEPYTRWAEAQGTIQNTPLFQSDEKYKTLSKFDVLTVFQNHVKS LERNFNDSKQEEKNKKFRQERKARDNFKVLLTELKRDGKITAGTTWTQIHPLIADAARYR AVAGNPGSTAMELFWDVVEEEERALRGTRNDVLDVIGVSAPDMDSNKMQADKSIQDKRFE VTPKTTFEEFEAVVRGDARTANIERKILELIFERVQQKRTKRTDEDKVQRRALDDLRVAM KRLEPPITVTDTYEQVKARLVQSEAFRTVNSEEARRGAFDKYIRRLKEKDEENENERQRR RERPDGHRDRGERSYRSGRSARSRSRSPEHNTYEADRRHAMADRERNYRKTSAAEVLLSD RRSADGHHDSVRDRERDRDRDRDRISERDRERDRDRDRERDRDRARDYRDRDRDRDRERD RDRDHGRDRDRDRDRDHRDHRDYDRRSRPADDFNHYDRERRTREEDRERIYRRRVLERDV DELPYGDERPSSSSRRPRPEEDDHDRRSPRQAKRIKVEDDRAATPSAATATAQPKSAAAA PAAIKEEKPSPSVRAGSEEGEIEED NT seq 2598 nt NT seq  +upstreamnt  +downstreamnt atgaatggacattttgcgccgccgggggcgcccgcagtttggacagaacacaagactccc gatggccgtacatactattacaatattttgaccaaggttacgcaatggaccaagccggag gaaatgatgacacctgccgagcgcgcgctggcaaaccaaccatggaaggagtacacagca gagggaggccggaagtattggtataacactgaaacaaagcagagctcctgggagatgccc gatgtctacaaacgagccttgggagctggtgattctgctgccaccacacctacaggccca tcagcttcatttggtgcggctggaggaggtagtggtcatcatggcggttcgtatgaccac caccaccagcaacgcgatcatcgggattatcgcgaccatagggagcccatgggcgagtcc agacaactcacctatggcagaaacattcaggcgcaagccttcgtctcccccaacaacgat cctgagtatgccaccgccgaagaggcagaggcggcgttcgtgaagctccttcgcagcagt aaagtccagcctgattggacctgggagcaggctatccgcgccattgtcaaagatccccag ttccgcgccatcaaagatccgagggatcgcaaagctgcctttgagaagtattgccacgat gtcgttgtgcaagacaaggaacgtgccaaggaaagactgactaaacttcgcgctgacttc gccaccatgctccggagccatccagagattaagcactacacccggtggaagacagcccgg cccatgatcgagggcgagaccatcttccgctcgactaacgacgagaacgagcgccgtcag ttgttcgaggactacgttagtgacctcaaacgggctcacaaggagcagcaggtcacaatg cgcaagagcgctatggatggtctgatcgaactgcttcccactctcagtttggagccctac actcgctgggctgaagcacaaggtaccatccagaacacccccttgtttcaaagtgatgag aagtacaagacactcagcaagtttgacgtgttgaccgtcttccaaaatcatgtcaagtcc ttggaacgtaacttcaacgactcaaagcaggaagagaagaacaagaaattccgccaggag cggaaagctcgtgataacttcaaagtcctcctcacagagctgaagagggatggcaaaatc actgccggcaccacctggacccagatacaccccctgatcgcagacgctgctcgctacaga gctgtcgccggtaatcccgggtctactgccatggagctgttttgggatgttgttgaggag gaagagcgcgctctcaggggcactcgcaatgatgtgcttgacgttattggtgtaagtgct cccgatatggattccaacaaaatgcaagctgacaagtcgattcaggacaaacgattcgaa gtcaccccgaagaccacttttgaagagtttgaggcagtcgtcaggggtgatgctcgtacg gctaacattgaacgtaaaattcttgagcttatttttgaacgggtccagcagaagcgcaca aagcgcacagacgaagacaaggtgcagcgccgcgctctcgatgaccttcgtgtagccatg aaacggttggagcctcccatcaccgtcactgatacttacgaacaggtgaaggccaggctt gtccagtctgaggcattccggactgtgaactctgaggaagctcgtcggggcgcctttgac aagtatattcgtcgccttaaggagaaggatgaggaaaatgaaaacgagcgccaacgccgt cgggaacgcccagatgggcatcgtgatagaggtgagcgatcctaccgaagtggacgttct gctaggagccgcagccgcagccccgaacacaatacctatgaggccgatcgtcgccacgcc atggccgaccgcgagcgtaactacagaaaaaccagtgcggccgaggttctactttccgat cgtcgttctgccgatggccaccacgattcagtgcgtgatcgggaacgtgacagggaccgt gatcgggatcgcatctctgagcgagatcgtgaacgtgaccgcgaccgcgaccgtgagaga gatcgtgatcgggcccgcgactatcgggatcgtgatcgtgaccgggaccgtgagcgagat cgcgaccgggatcacggccgtgaccgcgatagagaccgtgacagagatcaccgcgaccat cgcgactatgaccggcgctctcgccccgccgacgacttcaaccactacgatcgtgagcgc cgcacacgtgaggaggatcgggaacgtatttatcgcaggcgagtacttgagcgcgacgtt gatgagctgccatacggtgacgagcggcccagttcctcatctagacgcccgcgccccgaa gaagacgaccacgaccgaaggtctccccggcaggcgaagcgcatcaaggttgaggatgac cgtgccgctaccccctcggccgccaccgccaccgcccagcctaagtctgccgctgcagct ccggcagctatcaaggaagagaagccctcccccagtgtccgcgctggtagtgaagagggc gagattgaggaggattaa

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