Podospora pseudoanserina: QC764_116040
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Entry
QC764_116040 CDS
T09816
Name
(RefSeq) hypothetical protein
KO
K11701
helicase required for RNAi-mediated heterochromatin assembly 1 [EC:
5.6.2.5
]
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsa03036
]
QC764_116040
Enzymes [BR:
ppsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
QC764_116040
Chromosome and associated proteins [BR:
ppsa03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
QC764_116040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
Viral_helicase1
ResIII
PhoH
DEAD
Motif
Other DBs
NCBI-GeneID:
87963717
NCBI-ProteinID:
XP_062805872
LinkDB
All DBs
Position
1:5616258..5621138
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AA seq
1197 aa
AA seq
DB search
MASPSEERQAASETAFSIIEKHVCYRPAEGQGWKSMPVLPTPQEVLEPTSVDPPINPVDR
PWSSKEEYLTAQYSLLRLDAIEGLRFSVTRYVDTCRTGARVIFDDEYCSVYDEVRVKGFF
MTKIAPFSRVEFSTPYNVQWKTTKRLMDGTVVALSTKKDKFRTICKIATVAQRPYAVGRD
FDSTVAVAVDLIWANPEDAVIDPALEMVMIESRNGYYEASRHTMLGLQHVAETTSALDKY
IIGAHTADTVPEFIRTNPTMDLSSLVPVTASNGSQALLDVKESLKNYDIVKKGFPTLEDV
AVLDESQLDGLHRIISNELAIVQGPPGTGKTFTSVQALKILVANRRKHGGPPIIVAAHTN
HALDQLLTFCLEFEVLRLGGFTKNEDIKKCTVFERQRAERGGRQSDIKSRNNEKRRLEKR
QKELIQDLKIMQQDVFGKRLIDPDRLLEVGVITQEQHDSLKIFSGSTNPLASSTATFEPW
LGESLVRMEILRSTTNTRFELNEDELFRREEEYKLDENDLVHAVSDQEEEQLRIKGEWVP
LEHVWSAKSAAGLSSSTRAAQRSLKEEDFYSIKKSIRGEVYRHLQTELLKHTTLKFASLL
EQYNNVCKQLKALTDLQKWEMVQRQKIDIVGCTMTGLAKYRGILAALQPKSLLVEEAAET
REVDIVSALYPSIQQLILIGDHQQLQPKCNILWLGAPPFNFTVSLFERFVNLRMRYTMLR
QQRRMKPELRRILDPFYPGLLDHPVVLSPDNRPDIPGMGDKSSWLFHHEWPEETSSDSSK
FNREEARMITHFASYLVKNDTPPANITILTFYNGQRTLLNKIKEYDYKISTVDSYQGEEN
DIVILSLVRSPGEYRRWRCGFLEDKHRAVVAISRARRGFYVFGNFLNVLNTRSAQSLWAD
IWNGFAHQKRIEEGIPLTCKAHQNEIWVRTVDDWGDNAGGCDEPCGQTRPCGHPCTLKCH
QTDHSRLRCSQPCLEKLPCGHGCQNFCSQVCACDCAAFRTLSADIVAVGISRPTRTSMSL
EQRMQSISVEGVGESSKVVVRGSTQASTEWRQFPANVQCQDANLHRGWASQTAQNGSTSI
VRDTYQQTTMVNGRRSNLGPRNVRAIKASKSYCQPPRAKAASPTISDTASFQNNTTQVPA
TQQQLNTVLSSAPVPDLLGDLDGVAFSQSVMVNRVAGEAPVVVGQAALEGEELLIEL
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccttctgaggagaggcaagcggcctcggagactgccttttcaataatcgaa
aagcacgtatgctaccggccagcggagggccagggctggaagtccatgccagtgctccca
actccgcaggaggtgttggagccgaccagcgtcgatccgccaatcaatcctgtggatcgg
ccatggtcttccaaggaggagtacctcactgctcagtatagcctgctaaggttggatgcc
atcgaaggcctgcggttctcggtcacgagatacgttgatacctgccgaacaggcgccaga
gtgatttttgatgatgaatactgcagcgtctacgacgaggtccgggtcaaaggctttttc
atgaccaagattgctccgttctccagagttgagttctcaacgccgtacaatgtacagtgg
aaaacaacgaagcgcctcatggatggaaccgtcgtggctctgtcaaccaagaaagacaag
ttccggaccatttgcaagatcgcaacagtggcccagcgtccgtacgctgttgggagagat
ttcgattcgacggttgcggttgcggtagatttgatctgggcaaatccagaggatgctgtt
atcgacccagctctggagatggttatgattgagtcgcggaatggatactacgaagcatcg
cgtcacacgatgctgggccttcaacatgtcgcagaaaccacatccgcgctcgacaagtat
atcataggtgcccataccgcggacactgtgccagagttcatccgcaccaaccccaccatg
gacttatcctctttggttcctgtgacggcgagcaatggctcccaggcactcctcgatgtg
aaagagtcgctcaagaattacgatatcgtgaagaaaggcttccccactctcgaggacgtt
gcagttctggacgaatcccaactggatggtctccatcgtatcatctcgaacgagctcgcc
attgtacagggaccgccgggtacaggcaagacatttacctcggttcaagctctcaagatt
ctggttgccaaccggcggaagcatggtggcccgcctattatcgttgcagctcacaccaat
cacgccctcgaccagctgcttacattctgtctggaattcgaagtcctgcggttgggcggc
ttcacaaaaaatgaggacatcaagaagtgcaccgtctttgagagacaacgggccgagaga
ggcggtcggcagtccgatatcaagtcaagaaacaacgagaagcgaaggctagagaagcga
cagaaggagctcattcaagacctcaagatcatgcaacaagatgttttcggcaaacgtcta
attgatcccgatagactgctggaggttggtgtcatcactcaagaacaacacgactcgttg
aaaatcttttccggatcaaccaaccctcttgcatcctcgaccgccactttcgagccatgg
ctgggtgagagccttgttcgcatggagattttgcgcagtaccaccaataccaggtttgag
ctgaacgaggacgaactcttcaggcgtgaagaggagtacaagctggatgagaacgacttg
gtacatgctgtaagtgatcaggaagaggagcaactgcgcatcaagggggaatgggttccg
ctggagcatgtctggtcagcaaaatcggcagctggcctgtcaagttcgactcgtgctgcc
cagagaagcttgaaggaggaggacttctattcgatcaagaaaagcatccggggcgaggtt
taccggcatttgcagactgagttgttgaagcatactaccctgaagtttgccagccttctt
gagcaatacaacaacgtttgcaagcagcttaaggcgctgactgatttgcaaaagtgggaa
atggtccagagacagaaaatcgacattgttggctgtaccatgacaggtctcgccaaatac
cgtggcatccttgcggctcttcaaccaaagtcacttctggtggaggaggcggcggaaact
cgggaggtagacattgtgtctgctttatatccatcgatccagcagctcatcctcattggc
gaccatcaacaactccagcccaaatgcaacatcttgtggcttggtgcgcctcccttcaac
ttcaccgtttcactgtttgagaggtttgtgaacctgaggatgcgatatactatgcttcgc
caacaacgccgtatgaaaccggagctgcgacggatcctggacccattctaccctgggcta
ctcgaccatcctgtcgttttgtcccccgacaaccgtccagacatcccaggaatgggcgac
aagtcctcttggctcttccaccacgagtggccggaagagacaagctcggactcgagcaag
ttcaatcgtgaagaggccaggatgatcacccactttgcttcctatcttgtcaagaatgac
acacccccggcaaatattacgattctgaccttttacaatggccagcgcacgctgttgaac
aagatcaaagagtacgactacaagatttccacggtggactcgtaccaaggagaggagaac
gatattgtgattctgtcacttgttcgaagcccaggagaatatcgtcgatggaggtgcggg
tttttggaggacaaacaccgtgcagtagtcgcaatcagtcgcgctcgtcgagggttttat
gtttttggaaactttctgaatgttctcaatacgcgttcagcccagtcactctgggcagac
atctggaatggctttgcccaccagaaaaggattgaagagggcattcccttgacttgcaag
gcccatcagaatgaaatctgggtgaggacggtggatgactggggtgacaatgccgggggg
tgcgatgagccatgtggacagacacggccatgtggccacccatgcactctcaagtgccat
caaactgatcacagccgtctacgttgcagtcagccctgcctcgaaaagctcccctgtgga
catgggtgtcagaacttctgcagtcaagtttgcgcttgtgactgcgccgcctttcgaact
ttgtccgctgacattgtggcagttggaatatcgagaccaaccaggacatcgatgtctttg
gagcagcgaatgcagagtatcagcgttgagggggttggcgagtctagtaaggtagtggtg
cgaggttcgactcaggcatcgactgaatggcgacaattccctgccaacgttcaatgtcag
gacgccaatctgcaccgaggatgggcctctcaaactgcgcagaatggttcaacctccatt
gttcgagacacataccagcaaacaacaatggtgaatggtcgtcgttccaacctcggccct
cgaaacgttcgtgccattaaggcgagcaagtcgtattgtcagccgcctcgagctaaagca
gcatcgcctaccatatcagacacggccagtttccaaaacaatacaacccaagttcctgcc
acccaacaacaactgaacactgtgttgagctcagccccagtgccagacctacttggagat
cttgacggtgtagccttctctcaatctgtcatggtaaatcgtgttgcaggagaggcgcca
gttgttgtgggacaggcagctctggagggcgaggagctattgatagagctttaa
DBGET
integrated database retrieval system
