Podospora pseudoanserina: QC764_117500
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Entry
QC764_117500 CDS
T09816
Name
(RefSeq) hypothetical protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppsa04121
]
QC764_117500
Ubiquitin system [BR:
ppsa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
QC764_117500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_LRRK2
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
DNA_pol_phi
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_DCAF12
DUF2722
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
WD40_like
CDC45
NBCH_WD40
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
87963879
NCBI-ProteinID:
XP_062806066
LinkDB
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Position
1:complement(6187631..6189812)
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AA seq
689 aa
AA seq
DB search
MSSDNYRGDPNDGGPLDSDDWTSYVPYSMHEATRERVEDGEEYDQEYYDEILREEMAEHE
RLHASGDAEGLELEVVLEQVPVGNEDDEDDEDEEDEEDDEDEEDEEDEEDEEDEEDEEED
DDDNQATAEEREGGQLLRRIVRLVGNGASGAVGLSQRQILALLRGHDLTDLIFDDAEVDE
MMYQRRTNRQDPDRFPKVPSEEGRKLMESGAFGSFDIRDRRYKDISRRILDRELGLGGKA
EQLRNRGMMLQQMIPVSKPEMIIHYDDPVCCGQFSDDGNFFYTCNKDFKVRLYDTSNVYD
WKYYKTFDYPFGQWTMTDADLSPDNRWLAFTSLQPEVAIAPTDPKDTGDSYTLNFAGGHS
QPGYGGSFAIFSVRFSGDGRQLVAGTNTDSVVVYDIETRTTLHHVHGHNDDVNAVCFADK
NSPHILYSGSDDCTIKVWDTRSIGDGRPAGAFVGHTEGLTYIDSKQDGRYILSNGKDQSM
KLWDLRKAMSTSTFLSTNPTAITQSPDYQFDYRWQEYDDSRWYQHPHDNSVVTFRGHKVQ
RTLIRCHFSPPNSTDSRYVYSGSADGHVYIWNMDATLAKTIDVQKATESATGSNTRLRMR
RYRLHSFENDWSTIVRDVGWHPNAPVLVASSWNGSANDTGTASVHGYNEADDDDGEESED
EGMAMGRVVDEKLNAPRVATGGWRQRYDM
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgacaattaccgcggtgaccccaacgatggcggcccgctggattccgacgac
tggacctcctacgtcccgtattcgatgcatgaagctactcgcgagcgggtcgaagacgga
gaggaatatgaccaggagtattatgatgaaattttgagggaagaaatggcagaacatgag
cggcttcatgcgtccggcgatgccgagggactcgagttggaggttgtgttggagcaggtt
ccggtcggtaatgaggatgatgaggatgatgaggatgaagaagatgaagaagatgacgaa
gatgaagaagatgaagaagatgaagaagatgaagaagatgaagaagatgaagaagaagat
gatgatgataatcaagctactgccgaggagagggaggggggtcagctactgaggagaatt
gtgagacttgttgggaatggtgcctcgggggcagttgggttgagccagcgacagattctt
gctttgctgagagggcatgatcttacggacttgatttttgatgatgccgaggttgatgag
atgatgtatcagcggcggaccaacagacaagacccggataggtttcccaaggtaccgagt
gaggaggggaggaaactgatggagtcgggggcgtttgggtcgtttgatatccgtgatcgg
aggtataaggatatctcgaggaggattctcgatcgagagctaggtctgggcggcaaggct
gagcagctgaggaatcgaggaatgatgctgcaacagatgataccggtatccaagccagag
atgattatccattacgacgatcccgtttgttgcggccagttctccgacgatggcaacttc
ttttacacctgcaacaaagactttaaagtacggttatacgatacctcgaatgtttacgac
tggaagtactacaaaacgttcgactacccgtttggtcaatggacgatgaccgatgccgac
ctcagccctgataaccgctggctggcgtttacgtcgttgcagcctgaagttgcgattgct
cccaccgacccgaaggataccggcgattcatacacacttaactttgccggagggcacagt
cagcctgggtatggtgggagctttgctatcttctccgtgaggttctcgggcgatgggcgt
cagcttgtcgcgggcacgaataccgactccgtggtagtgtatgacatcgaaacacgcaca
acattacatcacgttcatgggcataacgacgatgtgaacgccgtttgctttgccgacaag
aactcgcctcacatcctgtactccggctcagatgactgtacgattaaagtatgggacacc
cgttccattggtgacggccgcccagccggggcctttgtaggacacaccgaaggccttacc
tatatcgactccaagcaggatggtcgttacatcctttccaatggtaaagaccagtcgatg
aaactgtgggacttgcgcaaagcaatgtctacctccaccttcctttcaacaaacccaacg
gccatcactcaatctccagattatcagttcgactaccgctggcaagaatatgacgactca
cgatggtatcagcacccccacgacaactcagtcgtgactttccgtggacacaaggttcag
aggacactcatcagatgccacttttcgccacccaacagcacagatagtcgatacgtctac
tctggaagtgcagatgggcatgtatacatttggaacatggacgccacactcgcgaagacc
attgacgttcaaaaagccacagagtcagccactggaagcaacacgagactcaggatgagg
cggtatagattgcatagcttcgagaatgactggagcactattgtgagagatgtgggatgg
catccgaatgcgccggtactggtcgctagttcgtggaacggctcggcgaatgatacggga
acggcaagcgtgcatgggtacaacgaggctgacgatgatgatggggaggagagtgaggat
gaggggatggcaatggggagagtggtggatgaaaagttaaatgccccgcgggtggctact
ggaggttggaggcagagatatgatatgtaa
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