Podospora pseudoanserina: QC764_119150
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Entry
QC764_119150 CDS
T09816
Symbol
smd1
Name
(RefSeq) Sm snRNP core protein Smd1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC764_119150 (smd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsa03041
]
QC764_119150 (smd1)
03032 DNA replication proteins [BR:
ppsa03032
]
QC764_119150 (smd1)
Spliceosome [BR:
ppsa03041
]
Complex A
U1 snRNP components
Sm proteins
QC764_119150 (smd1)
U2 snRNP components
QC764_119150 (smd1)
Complex B
U1 snRNP components
QC764_119150 (smd1)
U4/U6.U5 tri-snRNP components
QC764_119150 (smd1)
Complex C
U2 snRNP components
QC764_119150 (smd1)
DNA replication proteins [BR:
ppsa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
QC764_119150 (smd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
87964042
NCBI-ProteinID:
XP_062806250
LinkDB
All DBs
Position
1:complement(6824919..6825695)
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AA seq
125 aa
AA seq
DB search
MKLVRFLMKCQNESVTIELKGGTIISGTIASVSPQMNTALRNVKMTPRGQEMIQLETLNV
RGSTIRYYILPDSLPLDSLLIDDSSKPKNKARKEVDRGGARGGGRGGRGMRGGRGGRGGR
GRGRG
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcagatttcttatgaaatgccagaacgagtcagtgacgattgaactgaag
ggcggcaccatcatctctggaactatcgcctccgtctcgccacaaatgaacacggcgctc
cgaaatgtcaagatgacgcctcgcgggcaagaaatgattcagctggagactcttaatgtt
cgcggaagcaccattcgttattacatcctccccgattcgcttcccctcgactcgctcttg
atcgacgactcttccaagcccaagaacaaggcccgcaaggaagtggatcgtggtggtgcc
agaggcggcggtcgcggtggccgtggtatgcgtggaggaagaggcggtcgcggtggccgt
ggcagaggaaggggttaa
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