Podospora pseudoanserina: QC764_123380
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Entry
QC764_123380 CDS
T09816
Symbol
DBP4
Name
(RefSeq) ATP-dependent RNA helicase dbp4
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsa03009
]
QC764_123380 (DBP4)
Enzymes [BR:
ppsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC764_123380 (DBP4)
Ribosome biogenesis [BR:
ppsa03009
]
Eukaryotic type
90S particles
Helicases
QC764_123380 (DBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
87964440
NCBI-ProteinID:
XP_062806713
LinkDB
All DBs
Position
1:complement(8405157..8407972)
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AA seq
816 aa
AA seq
DB search
MAPTTGGAKTVVAHRNKKNSKSADATPKKPETKTLKRKRGQDELEKLKAAIQELDPKSPN
LTKFTDLPLCAATASGLRASHFEVLTDIQKAAIPLALKGHDILGAAKTGSGKTLAFLVPV
LEKLVQAQWTEYDGLGALIISPTRELAVQIFEVLRKIGRNHVFSAGLVIGGKSLKEEADR
LGRMNILVCTPGRMLQHLDQTAGFDVNNLQMLVLDEADRIMDMGFQSAVDALVEHLPKTR
QTMLFSATQSKRVSDLARLSLKDPEYVSAHEEAPTATPTNLQQSYIVTPLPEKLDTLWGF
IRTNLKSKMIVFFSSGKQVRFVYESFKRMQPGISLLHLHGRQKQVGRMEITRKFTSSKYA
CLFATDVVARGVDFPAVDWVVQVDCPEDADTYIHRVGRTARYESKGRAVLFLDPSEEKGF
LSRLEQKKIPITKVNVREGKKTSIKGELQSQCFQSADLKYLGQKAFITYVRSIYVQKDKD
VFKFNKMDLDGYAASLGLPGTPQVKFQKGAEEMRRANKQASRMAFDVGSDDDSSDYDAEG
KPKKKEVKTKYQKMAERQNQDVLSSHYRKLVDEGAEDDDEDDGFLSVKRVLGDKELDETA
EGINGKEIAGAKVVKIGDQEIVIDSKRAEKKLMSKAKVAKMMGKGQKLIFDEEGNAQPLY
VLQGLEDFQKEGDAKELRQKFVEAEGERVKEADVEDKELARKRRKEKRDRAKARERGEEV
ERERGPITQLDSGDEMDEDPLALLRSLPIAGGGGEQSEEDEPPKKKTKKWFQNDSDVEDQ
PERKKKASSGKKVIEMGYEPDNLQDLEALAAGLLED
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctactactggcggcgcaaagactgttgtcgctcatcgaaacaaaaagaactcc
aaatcggcggatgcgacaccgaaaaagccagagacgaagacactgaagagaaaaagagga
caggatgagctcgagaagctgaaggctgccattcaggagcttgacccaaaatcgccaaac
ctcactaaattcaccgacctccctctatgcgccgcgaccgcgtccggcctccgtgcctcc
cacttcgaggttctgacagacatccaaaaagccgccattcccctcgctctcaagggccat
gatatcctcggcgccgccaaaaccggcagcggcaagaccctcgctttccttgtccccgtc
ctcgagaagctcgtccaagcgcagtggactgaatacgacggcctcggcgctctcatcatc
tcccccacacgcgagctcgccgtccagatcttcgaagtgctccgcaaaatcggtcgtaac
cacgtcttctcggcaggcttggtcatcggaggcaagtcgctcaaggaagaagccgacaga
ctcggcaggatgaacatcttggtgtgcacccccggccgtatgcttcaacacctcgatcag
accgctggtttcgacgtcaacaacctccaaatgctggttctcgacgaagcagacagaatc
atggacatggggttccagtctgcagtcgacgcgctggttgagcatctccccaaaacaaga
caaacgatgttgttctcggccacccagtcgaaacgtgtttccgaccttgcgagattgagt
ctcaaggacccggagtatgtctcggcacacgaggaagcaccgacagccaccccgaccaat
ttgcagcagagctatattgtcacaccccttcccgagaagttggacacgctctggggcttt
atccgaacgaatctgaagagcaaaatgattgtctttttctcgtcagggaaacaagtacgg
tttgtgtatgagagcttcaagcgcatgcagcctggtatctcgctgctgcatttgcacggc
cggcaaaagcaggttgggaggatggagattacccgaaaattcacctcttccaagtacgct
tgtttgttcgccacggatgttgtcgcgagaggagttgattttcccgctgtggactgggtc
gtgcaggtagactgtcctgaggatgcggacacgtacattcacagggtgggtagaacagcc
agatacgagagcaagggtcgggcggtgctgttcttggatccgagtgaagagaaggggttt
ctgtccaggctcgaacaaaaaaagattccaatcacaaaggtcaatgttcgggagggaaag
aagacgagcatcaagggagagctgcaatctcagtgcttccagtcggcggacttgaagtac
ctcggacaaaaggcgtttatcacatatgtgaggtcgatttacgtgcaaaaagataaggac
gtgttcaaattcaacaagatggatctggatgggtatgcggccagtctgggattgccgggt
acgccacaggtgaaattccaaaagggggcggaggagatgagacgggcgaataagcaggcc
agcaggatggcgtttgatgttgggtcggacgacgacagcagcgactatgacgccgagggc
aagccgaagaagaaggaggtcaagaccaagtaccagaagatggcggagaggcagaaccag
gatgtgttgtctagtcattaccggaagctggttgacgagggtgcggaggacgacgacgag
gacgatgggttcttgtcggtcaagagagtgttgggcgataaggagctggatgaaactgct
gaaggaatcaacgggaaggagattgcgggcgcaaaggtggtcaagattggtgaccaggag
atcgttatcgactcgaagcgggcggagaagaagctcatgtccaaggccaaggtggccaag
atgatgggcaaggggcagaagctcattttcgacgaggagggcaatgcccagccattgtac
gtcttgcagggtctggaagacttccaaaaggagggagatgcgaaggagctcaggcaaaag
ttcgtcgaggccgaaggggagagggtcaaggaggcggatgtggaagacaaggagttggct
aggaagaggagaaaggagaagagggatcgggccaaagctagagagagaggtgaggaggtg
gagagggagagaggtccgattactcagcttgatagcggggatgagatggatgaggacccg
ttggctttgcttaggagtcttcctattgccggtggcggtggtgagcagtctgaggaggat
gagccaccgaagaagaagacaaagaagtggttccagaacgactctgacgtggaagaccag
cccgaacggaaaaagaaggcctccagtggtaaaaaggtcattgaaatgggctacgagccg
gataacttgcaggacttggaagccctggctgccggtcttttggaggactag
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