Podospora pseudoanserina: QC764_203220
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Entry
QC764_203220 CDS
T09816
Symbol
IRR1
Name
(RefSeq) cohesin complex subunit
KO
K06671
cohesin complex subunit SA-1/2
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa04111
Cell cycle - yeast
ppsa04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
QC764_203220 (IRR1)
04113 Meiosis - yeast
QC764_203220 (IRR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsa03036
]
QC764_203220 (IRR1)
Chromosome and associated proteins [BR:
ppsa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
QC764_203220 (IRR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STAG
SCD
HEAT_SCC3-SA
HEAT_2
PDS5
TPR_DNAAF5
DUF6594
PreAtp-grasp
Motif
Other DBs
NCBI-GeneID:
87964885
NCBI-ProteinID:
XP_062802798
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All DBs
Position
2:complement(<1493303..>1497013)
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AA seq
1211 aa
AA seq
DB search
MLSGRQPLMETSDNNATTGSPAPTSSARRSGRVSKAPNKFIPDAPGASKRKRNSDNDDED
DDDNRDNDDAENEAPDDEEDNNNASDDDDDGSETAAEEPRRAKKKKKTPSSSSAKPRKPA
TKKPKTNGDAPGHDQIVGHLPSRPKKAVRLAITRPTDVGLYADIFASGDSSDKVATEWYH
KYQADDAAAVTELVNCILLSAGCDQQVTPDDIRDPENCSNRLADLQNVYTEEGITDYPLV
AKSKTTRSFRDLLVGFFKSLLTVLHETDMLYKDTALMENIARWVASMSSSTLRPFRHTAT
TVALAMEAGLVEIAKKLDDRVSKMTQQLDAEKKRKGKNRERLAVIEKNLKEAEENQSICQ
AQILDFFDTVFLQRYRDVDARIRCECVEALGGWIWNLPTQFETPEYLRYLGWMLTDAMPQ
TRLESLKQVTRLFKRDAEKLGHFIDRFRPRLVEMATKDADVSVRVAAIHAIHILKETGML
EPDEIDSIGRLIFDSELRVRRAVIDFFAGCVDDLIEGKVEEMGGSDVIDEVLGEEDDDDY
SSPRRDWISVKCLAELLAAYDAQLEEEGSTAPPRGLDIAVGMVQAVAPETRISLASQVLY
EKIDQVKNWEILSGYLLHDHTTSTKSKSRSKASRSNSNEAAFKAAVAPEGNEEAIILEIL
ASAVKLGLSPNTEDGHRRKARTDAADTAEESAIHLATNIPRLLNKFGADEKTAVMVLRLE
HSLPLDIFQQLRQDSTTFSRLLDEICTQFDRHVDRGVLAEATAALLHARKHDELQEITDS
KIADLWEIVINALRHFDKNNELSVRGNMDPATITGLGNILLKMSKLASIANPTEFLEGGD
QPAIELLIKIVHRGKLDVVDEALDDLEDEAVSTAVSSVQFYFLWKVRALIGSVQSRADIP
RDDILTLNSLRQDYSRNLIWTLSSRGTNDELRLFSTGGLCDLHICFATLRTAVGQQGSQG
AASPKSYSDLDVLLEPIRADLITELIEIFDAAERAYAKCLRRRLNEPAEDEEPVEEELSD
DEGGEGEEDMTPMERRGKELRLERALCELAGKYVLCILAKMLDQGGRLRKRMLRNQSKLG
GNLKEVVAYLDEGRLRERVERYTNKGRKVAKGVRKGGPTAAAAAANKGGSGSGGGHQGGK
KLSEEIVVDGEDDSELSEVELELEEDPIEEEAEEGGEEDLRRRGLAEEEVIDEGGEEGEG
ERMEEDSVIGD
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgttatccggacgacagcccctcatggaaacatcagacaacaacgcgacgacgggctct
cccgctcccacctcttcggcgcgccgctcgggacgcgtctccaaagcgcccaacaagttc
atccccgatgcgcccggcgccagcaagcgcaagcgcaactcggataacgatgatgaagat
gacgacgacaaccgggacaatgatgacgccgagaacgaggcccccgacgatgaagaggac
aacaacaatgcgagcgacgacgatgatgatggctccgagacagccgccgaagaaccacgc
cgcgcaaagaagaaaaagaagacgccttcttcgtcgtcggcgaaaccgagaaagccagcg
accaagaagccaaagaccaatggtgacgcgcccggtcatgaccaaatagtaggccatctg
cctagcaggccaaagaaggcggttcggctcgccatcacacgtccgactgatgttgggtta
tatgccgacatttttgcttcgggcgactcctcggacaaggttgcgacagagtggtaccac
aaataccaagccgacgatgcggctgccgtgacggagctggtaaactgcatcttgctgtcg
gccgggtgtgaccagcaggtcacgcccgacgacatccgagatcccgaaaactgctccaac
agactggcggatctgcagaatgtctacaccgaggagggcatcacggactaccccttggtt
gcaaagtccaaaacgacccggtctttccgcgatctcttggtcggcttcttcaaatcactg
ctgacggtcctgcacgagaccgacatgctctacaaagatactgccttgatggaaaatatt
gctagatgggtggcttccatgtcttcgtccacgcttcggcccttcagacacacggccacc
accgttgcccttgctatggaggctggcttggtcgagattgccaagaagctggatgaccgc
gtcagcaagatgacgcagcagcttgatgccgagaagaagcgcaagggcaagaacagggag
cgtcttgctgtgattgagaagaacctgaaggaggctgaagagaaccagtccatctgccag
gcgcagatcctggatttcttcgacactgtgtttctccagcggtatcgcgatgttgacgcc
aggattcgctgcgagtgtgtcgaggctcttggtggctggatctggaacctgcccacacag
tttgagacgccagagtatttgcggtacctgggttggatgttgaccgacgcgatgccgcaa
acacgactggagtctctcaagcaagtcacccggctgtttaaacgggatgctgagaagctc
ggtcacttcattgaccggttcagaccacggctggtcgagatggccaccaaggacgccgat
gtaagcgtccgggtggctgctattcacgccatccacattctcaaagaaactggcatgttg
gagccagacgagattgactcgattggccggttgatttttgactcggagctgcgtgtccgg
agagcagtcatcgacttctttgccggttgcgttgacgatttgattgaaggcaaagtggaa
gagatgggcggcagcgatgttattgatgaggttctgggcgaggaagacgatgacgactac
tcctctcctcgtcgggactggatcagcgtcaaatgtctcgctgaacttcttgccgcatat
gacgcccagctggaggaggagggcagcaccgctccgccccgcggtcttgacattgccgtc
gggatggtccaggctgtcgcgccggagacgaggatatctctcgcctcgcaggtcttgtac
gagaagattgaccaggtgaagaactgggagatcctgtccggctatctccttcacgaccac
accaccagcacaaaatcaaagtccaggtctaaggcgtccaggagcaactctaatgaggcc
gccttcaaggcagccgtggcgcccgagggcaacgaggaggccatcattctcgagattctt
gcttcggccgtcaagcttggtctgtcgcccaacacggaggacggacataggaggaaagcc
cggacggatgcggccgatacggcggaggaatcggcgatacacctggcgaccaacattccc
cgcctgctgaacaagtttggtgcagacgagaagacagctgtgatggtgctacggctggag
cactcgcttccgctggacattttccagcagctgcgtcaagactccaccacgttcagtcgt
ttgttggacgagatttgcacccagtttgaccgccacgtcgaccgcggcgtcttggccgag
gcgacggctgcgctgctgcatgctcgcaagcatgacgagctgcaggagatcaccgacagc
aagattgctgacctgtgggagattgttatcaacgctctccggcactttgataagaacaat
gagctttccgtgcggggcaacatggatccggcgacgatcacggggttgggcaatatcctg
ctcaagatgtcgaaactggcgtcgatagcgaacccgaccgagtttcttgaggggggggac
cagcccgccatcgagctcctgatcaagatcgtccaccgcggcaagctggacgttgttgac
gaggcgctggatgatttggaggacgaggctgtgtcgactgccgtgtcgtctgttcagttc
tactttttgtggaaagtgagggcgctgattgggagtgtgcagtcacgtgctgatatcccg
agggatgacattctgacgcttaattcgctcaggcaggactattcacggaatctgatctgg
acgttgtcgtcgagggggacgaacgatgagctgaggttgttttccactggggggttgtgc
gacctgcatatctgctttgcgacgctgagaacggcggttgggcagcagggcagtcagggg
gcggcgtctccgaaatcgtacagtgaccttgatgtcttgcttgagccgatcagggctgac
ttgatcacggagctgattgaaatttttgatgcggcggagagggcctatgcgaagtgtttg
aggcggaggttgaacgagccggcggaggatgaggagccggtggaggaggagctgtcggat
gacgaggggggggagggggaggaggatatgacgcctatggagaggagggggaaggagttg
aggttggagagggcgctttgcgagctggcggggaagtatgtgctttgtatcctggccaag
atgcttgatcaggggggacggttgaggaagaggatgttgaggaatcagagtaagcttggg
gggaatttgaaggaggtggtggcatatttggatgagggccggttgagggagagggtggag
aggtatacgaataaggggaggaaggttgcgaagggggtcaggaagggggggccgactgct
gctgctgctgctgctaataagggtgggagcgggagtggtggggggcatcaaggggggaag
aagttgagtgaggagattgtggttgatggggaggatgacagcgagttgtccgaggtggag
ttggaactggaggaggatccgattgaggaggaggcggaggaagggggggaggaggatttg
aggaggcgagggttggcggaggaggaggttattgatgaggggggggaggaaggggaaggg
gagaggatggaggaggatagtgtgataggggattga
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integrated database retrieval system
