Podospora pseudoanserina: QC764_210900
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Entry
QC764_210900 CDS
T09816
Symbol
cbc1
Name
(RefSeq) Nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03013
Nucleocytoplasmic transport
ppsa03015
mRNA surveillance pathway
ppsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC764_210900 (cbc1)
09122 Translation
03013 Nucleocytoplasmic transport
QC764_210900 (cbc1)
03015 mRNA surveillance pathway
QC764_210900 (cbc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_210900 (cbc1)
03041 Spliceosome [BR:
ppsa03041
]
QC764_210900 (cbc1)
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
QC764_210900 (cbc1)
Spliceosome [BR:
ppsa03041
]
Common components
Common spliceosomal components
Cap binding complex
QC764_210900 (cbc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
87965660
NCBI-ProteinID:
XP_062803662
LinkDB
All DBs
Position
2:complement(4019531..4022483)
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AA seq
860 aa
AA seq
DB search
MADYDRRGGGGGGRGGGGGGYNRKRRYRDDNEDDNHYRGNNSRRRYDAPPHVRLRKQLIA
IAENPMIERHDEISQIANLFTDNWDDDVLLRGNFTDLVLQLCVEQPLKTPFLAGVLMVVN
TNKPEAMDLLLEKAARLIEDKLREGGWRDVKLYLKLVGCLQGVLEGEGVFGVLGELFERA
VGLQTASSEDTIGTEIVKIILLTLPYVMAAGSPEQVQQEWQQKAADLLENTAIIASEPHP
LQAVIEPYHPEAGEENPAQSQSLISLLQAQLQAEAAQGWALSCLPRPWQFPVGEVETVAK
LASAKKHVLPNIVIPKTVVRGPRPLFPEVYISVYGQQEVESVPPPTSLASSLIRDALLDT
INVLHFNRNATARQLIEVDCYFAPRTFALRGTPFDRLRDIEKPKSTWKPEDVAVDAVFTQ
LFLLPNPEHKLVYYHSVLTEACKLAPAAIAPSLGRAIRYLYRNAPRMDLELAYRFMDWFS
HHLSNFGFTWKWTEWVDDVELSGLHPRKAFIVGSIDKEIRLSFAQRIKNTLPEPYQKLIG
PEKEKDVPDFKFANDDTPFAAEGREIAALLKRKAPDEEIDAVIQRIQSQAIDRDLDALVA
STDVFVTCVLYVGSKSLSHVLAAIERTKDRLADAGAASDASRTQIIEAVMAYWSVHPGVA
LSIVEKLLNYSILTPLTVINWALNVQAGKTRGEALAWAHMYELVFNTVIKVTGRVRQLVV
KASQPDEMVDDETRDNEVRNMRELFGAIEDSLGAWAGGTKDEMLESNARGEEDGLVRRWG
TRWLRVFKRRQAIEEAFLVEAVRERERREEVRKEWEVVERQRREERERKEAEEKERNGAN
GAEEEKKENGVEGEVDIIEQ
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggccgactacgacaggagaggaggaggaggaggaggcagaggtggtggtggcggtggg
tataaccggaaacgtcgttatagagatgacaatgaagacgacaaccactaccgcggcaac
aactcccgccgccgctacgacgcgcccccccacgtccgcctccgcaagcagctcatcgcc
attgccgagaaccccatgatcgagcgccacgatgagatttcccagattgcgaacctgttc
accgacaactgggacgatgacgtcttgctcagaggcaactttaccgacttggtcctccag
ttgtgcgtggagcagcctctcaaaaccccctttttggcgggcgtgttgatggtggtcaac
accaacaagcccgaggcgatggatcttttactcgaaaaagcggcgaggttgatcgaggac
aagcttcgggaaggggggtggagggatgtgaagctgtacctgaagctggtggggtgtctg
cagggcgtgttggaaggggaaggggtttttggtgtgttgggggagctttttgaacgggcg
gttgggttgcagacggcgagcagtgaggatacgatcggcacagagattgtcaagatcatt
ctcttgacgcttccgtatgtgatggctgctgggtcgccggagcaggtgcagcaggagtgg
cagcagaaggcggcggatttgctggagaatacggccatcattgcgagcgagccgcatccg
ctgcaggccgtgattgagccttatcatcccgaggctggggaggaaaacccggcgcagtcg
cagagtttgatttcgcttttgcaggcgcagctgcaggctgaggcggctcagggttgggcg
ttgagctgcttgccgagaccgtggcagttccctgtcggcgaggttgagacggtggccaag
ctggccagtgcgaagaagcacgttttgccgaatatcgttattcccaagacggtggtcagg
gggccgaggccgttgttcccagaggtgtatatctctgtttatgggcagcaagaagtcgag
tcggtgccccctcctaccagcctggcgtcgtcgctcatcagagatgcactgcttgatact
attaatgttttgcactttaaccgcaacgccacagcaagacagcttattgaggtggattgt
tactttgcgccgaggacttttgctctgagaggcacgccgttcgataggcttcgggatatc
gagaagccaaagtctacctggaagcccgaagatgtggctgttgatgccgtgtttacccag
cttttcctcttgcctaacccagagcacaagctggtttactaccactctgtgcttacggag
gcttgcaagctggcgcctgctgctatagcgcccagcttgggccgtgccattcgttacctt
tacagaaacgcgccgcggatggatctggagctggcgtaccggttcatggactggttctcg
catcatttgtccaactttggtttcacgtggaagtggactgagtgggtggacgatgttgag
ctgagcggcttgcacccgcgcaaggcgtttattgttggctcgatcgacaaggagattcgg
ttgagttttgcgcagaggatcaagaatacgcttccggagccgtatcagaagttgattggg
cccgagaaggagaaggatgtgcccgatttcaagtttgccaatgatgacaccccctttgcc
gccgaaggccgtgaaatcgccgcgctcctcaaacgcaaggcccccgacgaggaaattgac
gccgttatccagcggattcagtctcaggccatcgaccgcgacctcgacgccttggtggcc
agcacggacgtctttgtcacttgcgtgctctacgtaggcagcaagtcgctctcccacgtc
ctggcggcgatagagcgcaccaaggaccggttggcggacgctggtgcggcgagcgacgcg
tcgaggacgcagatcatcgaggcggtgatggcgtattggagcgtgcaccctggtgttgcg
ctgagcatcgtggagaagctcctgaactactccatcctgaccccgctgacggtgatcaac
tgggctctgaacgtccaggctggcaagacgcgcggtgaggcgctcgcgtgggctcacatg
tacgaattggtcttcaacactgtcatcaaggttaccggccgggtgaggcagctggttgtc
aaggccagccagccggatgagatggtggatgacgagacgagggataacgaggtgaggaac
atgagggagctgtttggggctattgaggacagcttgggggcttgggctggcgggacgaag
gatgagatgcttgagagtaatgctcgtggggaagaagacgggttggtcaggaggtggggg
acgaggtggctgagggtgtttaagcggaggcaggcgattgaggaggcgtttttggtcgag
gcggtgagggagcgggagaggagggaggaggtgaggaaggagtgggaggttgttgagcgg
cagaggagggaggagagggagaggaaggaggcggaggagaaggagaggaatggggcgaat
ggggccgaggaggagaagaaggagaatggggtggagggtgaggttgatattattgagcag
tag
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