Podospora pseudoanserina: QC764_211000
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Entry
QC764_211000 CDS
T09816
Symbol
CSL4
Name
(RefSeq) exosome 3'->5 exonuclease subunit ski4 (Csl4)
KO
K07573
exosome complex component CSL4
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC764_211000 (CSL4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_211000 (CSL4)
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
QC764_211000 (CSL4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
QC764_211000 (CSL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
S1
Motif
Other DBs
NCBI-GeneID:
87965670
NCBI-ProteinID:
XP_062803674
LinkDB
All DBs
Position
2:complement(<4067557..4069095)
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AA seq
218 aa
AA seq
DB search
MTTSNPTLAIPGQLLGSTSRYQPGPGTHIHNHNVHASLMGTVHIAQPAKAPGPVKRLTKI
TPAPAPAELPTISVTVPTRSAGSDHAGQKKREVLPEVGNVVLCRVIRITPRQAVVAILVC
GDTVLDAEWQGLIRVQDVRATEKDRVKIYESFRPGDIVRAEVISLGDQANYYLSTARNEL
GVILATSEAGNAMHPVSWKEYRDPETDLTELRKVAKPY
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatcaaaccccaccttggccatcccaggccagctcttgggttcaacatcccga
taccagcccgggccagggactcacattcacaatcacaacgttcatgcttcgctcatgggc
acagtacacatcgctcaacctgctaaagctccaggaccagtgaagcggctcacaaaaatc
acaccggccccggcccctgcggagctccccacaatctcggtgacggtccccacgcggtcc
gcgggctccgaccacgccggccaaaagaagcgcgaggtgctgcccgaggtagggaatgtg
gtactctgcagagtgattcgcatcacaccgaggcaggctgttgttgcgatactggtgtgc
ggcgacacggtgctggatgctgaatggcagggcttgatccgtgtgcaggatgtcagggct
acagagaaggacagggtcaagatctatgagagcttcagaccgggggatatcgtcagggct
gaagtgatctcactgggtgaccaggctaactattatctttccactgctcgtaatgagctg
ggtgttattttagccacgagtgaagccggcaatgcgatgcatcctgtcagttggaaggag
taccgggacccagagaccgacttgactgagttgagaaaggttgcgaagccatattga
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