Podospora pseudoanserina: QC764_211670
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Entry
QC764_211670 CDS
T09816
Symbol
ECM16
Name
(RefSeq) putative ATP-dependent RNA helicase DHR1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsa03009
]
QC764_211670 (ECM16)
Enzymes [BR:
ppsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QC764_211670 (ECM16)
Ribosome biogenesis [BR:
ppsa03009
]
Eukaryotic type
90S particles
Helicases
QC764_211670 (ECM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
DEAD
HA2_N
OB_NTP_bind
AAA_22
AAA_19
nSTAND3
PhoH
T2SSE
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-GeneID:
87965738
NCBI-ProteinID:
XP_062803747
LinkDB
All DBs
Position
2:complement(4310892..4314578)
Genome browser
AA seq
1228 aa
AA seq
DB search
MAVKKFVPRQRKRKHLERQRAEERATLDTELDADSNVVEITPAQQAEAEEKRKQLRESLK
PDGTKVTGKKAKRLEKYIESKLKKDENRELLKKLEANKIDTSLFSSAKSIGQVKETKKQA
IRRVLREKDAGIGVDKSDLTLLYQKRTVKKGEVPQHRQPEESDEPEEEGSRTTQQGTSAK
QDQPQSSTTAAAPTTSAVGSGLKRPLEVDDSGRPVLAKRQKRGGVKSKFSLAAPVVHEEP
VSDEFGGFSSADEEESGGEDEDESDAGGSEKSEEQSDEDMSDAGSGEDEEEEDDNEESSE
EGSGSEDEEDEESMKERRKERSSAFKAWAHQQRNEALGYTPTTSTILEMPRPENFQPRPL
EQEPLPIELQPTTNVTRKSHAVTVTRNPEIEEARFKLPVVAEEQKIMEAIHNNDVVVICG
ATGSGKTTQLPQFLFEAGYGDQKGPTPGMIGVTQPRRVAAVSMSKRVGQEMGDFSKVVAY
QIRFEGTVDPNTAIKFMTDGVLLREAAQDFALRKYSAIIIDEAHERSVNTDILIAMLSRV
VKLRAELAKEDPTTKPLKLIIMSATLRVEEFTQNAALFETPPRVIDVEGRQHEVTIHFAK
KTRHDYVEDAFRKISRGHRKLPPGGMLVFLTGQGEITQLSKRLKAAFGGGMNTASGPKVK
ISAKEAPIEAEDIDFGDIDDRAVHDMDEDEISDEEEEEKEFDIEDEESGTGPRKMHILPL
YSMLPTKEQMKVFEPPPDGSRLVILSTNVAETSLTIPGIRYVFDCGRSKERRYDPVSNVQ
SFQIDWISKASAQQRAGRAGRTGPGHCWRLYSSAIYERDFPLFADPELLRMPIEGVVLQL
KAMNLQHVVNFPFPTPPERESLVKAEKLLTYLSAITPEGQITPTGSTMSIFPLSPRFSRI
LLVGHLHGCLPYTIALVAALSAGEIFINEHQAIPALEESTEDFRTNEEVIAEEKRARVRQ
AYNAVHKNFCYLDDKSDAIKLLQVVGEFAHEPTEAWCESHFVRFKILKEIRQLQFQIADL
LRTNIPQHANFKLEEKLDPPSATQVQALKQMVAAGFIDQVAIRADKAPNPPETYRKPRRA
IDVPYIPLIPLEGDRKVEDPLDRLVYIHPTSPLAHLSTAECPEYICYAYLQKAGNTGADG
EKKVKTRMHALTDLTAGQIASLAKGTPLLTYGKPIKEVKGSESADGKTKEVWAIPYLRAE
GGAGGLGWPLPARRVTQRKVPGKGWIVE
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaagaaattcgtcccacgtcagcgcaagcggaagcatcttgagcgccaacgc
gccgaggagagagctactctcgacacagagctcgatgcagattccaatgttgttgagatc
accccggcgcagcaggctgaggccgaggagaagagaaaacagttgcgtgagtcactaaag
cccgacggcaccaaggtcactggaaaaaaggccaaacgtcttgagaaatacatcgaaagc
aagttgaagaaggatgagaaccgagagctccttaaaaaactcgaggccaacaagatcgac
accagtttattcagcagtgccaagtcaattggtcaagttaaggagaccaagaagcaagcc
atccgccgcgttctcagggagaaggatgccggtatcggcgtggataagtcagacttgacg
ctgctctaccagaagcgcactgttaagaagggggaggtcccacaacatcggcaaccggag
gaatccgacgagcctgaggaggaaggatccaggacgacacagcaggggaccagcgccaag
caagatcaaccacagtcctctacaaccgcggcagctcctaccacatcggcagtcggctct
ggtctgaaacggccactcgaggtcgacgactctggccgcccagtgcttgcaaagagacaa
aagagaggcggtgtgaagtcgaagttctcattagctgcgcctgtcgttcacgaagaacca
gtatctgatgaatttggcgggttcagctccgctgatgaagaggagtcgggtggggaggat
gaggacgagtctgatgctggtgggtcagagaaaagtgaagagcagtcggatgaggacatg
agtgatgctggcagtggagaggacgaagaggaagaggatgacaacgaagagagttctgaa
gaggggtccggctcggaggacgaggaagacgaggagtctatgaaagagcggcggaaagaa
agatcatctgcattcaaggcttgggcacaccagcaacgaaacgaagctctgggatacaca
ccaacaacttccactatactcgaaatgcccagaccagaaaacttccagccccgcccatta
gagcaagagccactaccgattgagttgcagccaacaaccaatgtcaccagaaagtcgcat
gccgtcaccgtcacaaggaaccctgagattgaggaggctcgtttcaagcttcctgtcgtg
gctgaggaacagaagattatggaggccatccacaacaacgacgtagtcgtcatctgtggt
gccactggctcgggaaagacaacacaactgccgcagtttttgtttgaggctggctacggt
gaccagaagggtcctactcctggcatgattggcgtcacccagccgagacgtgtggctgct
gtcagtatgtcgaaacgggttggtcaggagatgggagacttttccaaggtcgtcgcctac
cagattcggttcgagggcaccgtcgatcccaacacagccatcaagttcatgactgatggt
gttctcctccgagaggcggcccaggattttgcacttcgcaagtactctgccattatcatc
gatgaagcccacgagagaagtgtcaacaccgatatcctcatcgcaatgctcagccgagtg
gtcaagctgagagctgagctggccaaggaagaccccacaacaaagcctttgaagctgatc
atcatgtctgccactttacgtgttgaagaatttacacaaaatgccgcgctctttgagact
ccgccacgagttatcgacgtggagggccgtcaacacgaggtcaccatccacttcgccaag
aagacacggcacgactatgtcgaggacgcctttcgcaaaatcagcagaggtcatcgaaag
ctgccaccaggtggcatgcttgtgtttctcactggccaaggcgagatcacccaactcagc
aagcgtctgaaggctgcttttggcggtggcatgaacactgcatctgggcccaaggtcaag
atttcagccaaggaagctcctatcgaggctgaggatatcgactttggcgatatcgatgac
agagcggttcacgatatggatgaagatgagatttccgacgaggaagaagaggagaaagaa
ttcgacattgaggatgaggagtccggcacaggaccaagaaagatgcatatcttgccctta
tactcgatgcttccgacaaaagagcagatgaaggtcttcgagccacccccggacggctcg
cgattggtcatcttgtcgacaaacgttgcagagaccagtttgactattcctggtattcgg
tatgtcttcgattgtggcagatccaaggagcgccggtatgaccctgtgagcaacgtccag
agcttccagatagattggatcagcaaggcaagtgcgcaacaacgtgccggtcgtgccggt
cgtactggccctggccattgctggaggctgtactcgtctgcgatttacgaaagggacttc
cctctctttgccgacccagagctgctccgcatgcccatcgagggcgtcgttctacaactg
aaggccatgaacttgcaacacgtcgtcaactttccattcccgacacccccggagcgagaa
agcctggtcaaggctgagaagcttttgacctacctttcagccatcacacctgagggtcag
atcacgccaacaggctcgaccatgtccattttccccttgtcacctcgcttctcacgcatc
ctgttggttggacaccttcacggctgcctgccatataccattgctctggttgccgccctg
tctgctggtgagattttcatcaacgaacaccaagccattccagcattagaggagagcacc
gaagacttccgtaccaatgaagaggtgatcgccgaggaaaagcgagcgagagttcgtcaa
gcatataatgctgtccacaagaacttttgctacctcgacgacaagagtgacgccatcaag
ctgctccaggttgtaggagagtttgcccatgagcccacagaagcctggtgcgaaagccac
tttgtgcggttcaagatcctaaaggaaattcggcagctgcaattccagatcgcggatctc
ctgaggaccaacattccacaacacgccaatttcaagcttgaggagaaactggaccctcct
tctgctacacaggttcaagctctcaagcagatggttgccgcaggcttcattgatcaagtc
gccatcagggctgacaaggctcctaacccgcctgagacgtacaggaaaccacgtcgtgcg
atcgatgttccatacatccctctcatcccgcttgagggtgatcgaaaggttgaggatcct
cttgacaggctagtatacatacatccaacttctcctcttgctcatctcagcactgccgaa
tgccccgagtacatctgctatgcctacctccagaaggctggcaacacaggcgcagacggt
gagaagaaggtcaagacgaggatgcatgctttgacggacttgacagcaggccagatcgct
tctctagccaagggtacgccacttctcacgtatggcaagcccatcaaagaggtcaagggc
tctgaaagtgccgatggcaagacgaaggaggtctgggcgatcccatatcttcgggctgag
ggcggcgctggagggctgggatggccattgccagcaagaagagtgacacagcgcaaggtt
cctgggaagggttggattgttgagtaa
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integrated database retrieval system
