Podospora pseudoanserina: QC764_306420
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Entry
QC764_306420 CDS
T09816
Symbol
RAV1
Name
(RefSeq) regulator of (H+)-ATPase in vacuolar membrane
KO
K24155
rabconnectin-3a
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
QC764_306420 (RAV1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsa04131
]
QC764_306420 (RAV1)
Membrane trafficking [BR:
ppsa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
QC764_306420 (RAV1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
QC764_306420 (RAV1)
RAVE complex
QC764_306420 (RAV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
87966612
NCBI-ProteinID:
XP_062801775
LinkDB
All DBs
Position
3:<2204386..>2209050
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AA seq
1435 aa
AA seq
DB search
MQQLTAQISSQADKHNELRHRNQPSSPFCTLNYKPRTRHACDRLTISIAADESSPHHHHI
TTITTITTTITTITTTKHENHPSRPPLPHLQALATGYCQNASESGHRRITVYISGPAISI
LSPSPTSPSHLLQTIYDDDPTPLQSVALDEPTAKIAVITTSGTGRIYKPTINTLLPINSP
EREPRWVLQGTFFSSPSPSHPATLSWGSDGELLVSSSSSLQLWQTSRPEGDIHLSWSQPL
PNPAKMALLSYDSAYIASVGRYDKLVKVWRRLSYGSGGAGTEEGVDGARFDFVYLRHGDV
VTRLEWRRRPRHEGQTVENVLWTVDCKGRVKLWVGGDGHGMRELRLWGGLELGMKMGWVV
QGGDLMGAVEGVVERGRGEGVERVVEVGRRCHEVVVGLDGKGGVKVWGLEDVGWEPGAQK
RGGVWEIVEVKGVEGLDWGGAAGEHVEVQSYCDGKGLLQVLVHFFDGRIEVYETDLAALV
DPNPKRKRLERVAVWTGHSAPVKKVVRNFSGRAVVTRTESGQSVVWKHELDHGKGVAMLR
RQVVIQQAGHVHRMCVLRKGRFVVFLRHEKVELWDCRGAQARLLAEQRYDVPGKPLCLIV
LPRHKVEDYTTAHVATITSEKEGVGWEVKFPFYRPNDPTVKVANGRGEGDQGGCIREFVK
FTLEDAGDLGYVLPVDPAGADFHVSGFLDVFARDVAISYTHSGRVEFWTARVGHEGKGVE
WLSTSSLETGVANPALVSGSTLKKAALVSADRSTLTIWDIRGARLEYEQKFENSHTIRDL
DWATTPAKQSILAVGFPHRVLLLSQMRFDYLNKGPAWLPTREISIRQCTPHPIGDSVWLG
GGHLVIAAGNQLFVHDREFEASTSLVPATGLRIPHRKGKARQLDLFEVVDRLNGPLPVFH
PQFLSMCILAGRISLVHKVLQALRKTLRFWVEGDVVDDYLGLDLVEFYAGDGSLHNGGGH
PREYLNRRQSFDDGDEPFSEETAVDINERLTRIGIPQLSGHEQIQLVDIVECVGVVEKQR
RSLDENGARFMLAFRQHALRKGRANEVHISWREISWAYHSTSQDVLVDFVTKHNHGRMLW
EGARESGMFMWLGDNAAVRQQFEIIARNEYTKGEDKNPIDCSLYYLALKKKTVLQGLWRM
ASWNKEQASTSKFLANNFDDPKWRTAALKNAYALMSKRRFEYAAAFFLLADHLHDAVNVC
LNQLHDLQLAVAITRVYEGDNGPVLKRLLEEEVLSTAAKEGNRWLASWAFWMLGRRDMAT
PVFALLSTTPSSPPPDDGNLKSKSYLTDDPALIILYRQLRQKTLQTLRGATKVTPKVEWE
FVLHSAGLYDRMGCDLLGLDLVRNWEFFHPAAQAMTGLGGEINPLRLLKRRGSLVVADIP
IRGGPLSPLATPGGQMQVPGEMKTGGGGGTTAKPKPPPTVFEEPDANSLLDSFGF
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagctgacagcacaaatcagctcccaggcagacaaacataacgagttacgacac
agaaaccaaccgtcgagtcccttttgcacattgaattacaagccgagaacacgacatgcc
tgcgacagactcaccatatcaatagcagcagacgaatcctcaccacaccaccaccacatc
accaccatcaccaccatcacaaccaccatcaccaccatcacaaccaccaaacatgagaac
catccttccaggcctcccctcccccacctccaagccctagcaacaggctactgccaaaac
gcatccgagtccggccaccgtcgaataaccgtctacatctccggtcctgcaatctcaatc
ctctccccaagccccacctccccatcccatctcctccaaaccatctacgacgacgaccca
acccccctccaatccgttgccctcgacgaacccacggccaaaatcgccgttatcaccacc
tctggcacagggaggatatacaaaccaacaatcaacaccctcctcccgatcaactccccc
gagcgtgagccccgctgggtattacaaggaacctttttctcctctccctccccttcccat
ccggcaaccctctcctggggcagcgacggcgaacttttggtctcctcctcatcatccctc
caactatggcagacgtcccgaccagagggggatattcatttatcatggtcgcaaccgctc
cctaatccagcgaaaatggcgctgttgtcgtatgattcggcgtacatagcctctgtgggg
cgatatgacaaactggtgaaagtgtggaggaggctgagctatgggtctgggggtgcgggg
acggaggagggcgttgatggggcgaggtttgattttgtgtacctacggcacggggatgtg
gttaccaggcttgagtggaggaggaggccgaggcatgaggggcagacggtggagaatgtg
ctttggacggtggactgcaaaggaagagtaaagctttgggttggcggggatgggcatggg
atgagggagctgaggctttggggggggttggagttggggatgaaaatggggtgggtggtt
caagggggggatttgatgggggctgttgagggggttgtggaacgggggaggggggagggg
gtggagagggtggtggaggtcgggaggaggtgtcatgaggttgtggtcgggttggatggg
aaaggcggggtgaaggtttgggggttggaggatgtgggttgggaaccgggggcacagaag
agagggggggtctgggagattgtggaggtgaagggggtggaggggttggactggggaggg
gcagcaggtgaacatgtcgaggtgcagagttattgtgatggcaaggggctgttgcaggtg
ctggtgcacttttttgatgggaggattgaggtttatgagaccgatctcgcggctttggtt
gatccgaacccgaagaggaagaggctagaaagggtggctgtttggactgggcattcggca
ccggtcaagaaggtggtgaggaatttcagtgggagggcggtcgttacgaggacggagtca
gggcagagcgttgtgtggaaacatgagttggatcatgggaagggggtggcgatgttgagg
agacaggtcgtcatccagcaagcggggcatgttcaccggatgtgcgtgttgagaaagggg
aggtttgtggttttcttgcggcacgaaaaggttgagctttgggactgtaggggggctcag
gcgagattgctggccgagcagaggtatgatgtgccggggaaaccactgtgcctgattgtg
ctgccgaggcacaaggtggaggattacaccacggcgcatgttgcgacgattacgtcggaa
aaggagggtgttggttgggaggtcaagtttccgttctatagaccgaacgatccgacggtc
aaggttgcgaatgggcggggggagggggatcagggggggtgcattagggagtttgtcaag
tttacgcttgaggatgcgggggatttggggtatgtgttacctgttgatccggccggggcg
gatttccatgtttcggggtttttggatgtgtttgcacgggatgtggcgatttcgtacacg
cactcagggagggtcgagttttggactgcgagggttgggcatgaggggaagggggtggag
tggttgtcgacgagctcgctggagacgggggttgcgaacccggcgctggtcagtgggagc
acgctgaagaaggcggcgttggtgagtgcggatcggtcgacgttgacgatttgggatatc
aggggggcgaggctggagtatgagcaaaagtttgagaacagtcatacgattagggatctg
gactgggcgaccacgccggcgaagcagagtatcttggcggttgggtttcctcatcgggtg
ttgttgttgagtcagatgaggtttgattatctcaacaaggggccggcgtggctgccgaca
agggagatttcgatacggcagtgcacaccgcatccgattggggactcggtttggttgggg
ggtggacacttggtgattgcggcggggaaccagctgtttgtgcatgatcgggagtttgag
gcttcgacttcgcttgttccggcaaccgggctgaggataccgcatcggaagggcaaggcg
aggcagcttgatctgtttgaggttgtggaccggctcaatggcccgctgccggttttccac
ccgcagttcttgagcatgtgcatccttgccggaaggatctcgctcgttcacaaggtcctg
caggcgttgcgcaagacgcttcggttctgggtagagggtgatgtggtggatgattacctc
ggcctcgacctggtggaattctacgccggtgatgggtcactgcataacggcggtggccac
ccaagagagtacctcaaccgccggcagtcgtttgacgacggcgacgagcccttctcggaa
gaaacagctgtcgacatcaacgagcgcctcacccgcattggcatccctcagctctcgggc
cacgaacaaatccaactcgtcgacattgtagaatgcgtcggcgtggtcgaaaaacaacgt
cgctccctcgacgaaaacggagcaagattcatgctcgccttcaggcaacacgccctgaga
aagggaagagcaaacgaggtgcacatctcgtggcgcgaaatcagctgggcataccactcc
accagccaagacgtccttgtcgattttgtgaccaagcataaccacggcaggatgctgtgg
gagggcgcgagagaaagcggcatgttcatgtggcttggtgacaacgctgccgtgaggcaa
cagtttgagattattgcgagaaacgagtacaccaaaggcgaggacaagaaccctatcgat
tgcagcctctattacctcgccctcaagaagaagactgtcctccagggcctgtggagaatg
gcaagctggaataaagaacaggcctcgacgtcgaagtttctggcgaataactttgacgat
ccgaagtggcggactgcggcgctgaagaatgcttacgcgttgatgtcgaagcggaggttt
gagtacgcggctgcgttcttcttgttggcggaccatttgcatgatgcggtgaacgtctgt
cttaatcagcttcatgacctgcagctcgcggtggcgatcacgagggtgtacgagggtgat
aatgggccggtgctgaagaggcttctcgaagaagaagtcctatccactgcagcaaaagaa
ggaaaccgctggttagcgtcgtgggcattttggatgcttgggcgtcgcgatatggctacg
ccagtcttcgccctcctctccaccaccccctcctccccaccgccagacgacggcaacctc
aaatccaaatcctacctcaccgacgaccccgccctcataatcttgtaccgccagctccgc
caaaagacgcttcaaacactccgcggagcgacaaaggtcacgccaaaggtggagtgggag
tttgtgctgcattctgccgggttatatgaccgcatgggctgtgacttgctcggccttgat
ttggtgagaaactgggagtttttccaccctgccgcgcaggcgatgacggggttgggaggg
gagattaacccgttgaggctgttgaagaggagggggagcttggttgtggctgatattcct
atccgtggggggccactgtcgccgcttgcgacgccgggggggcagatgcaggtgccgggg
gagatgaagactggtggtggtggtgggacaacggcaaagccgaagccgcctccgacggtg
tttgaggagccggatgcgaactccttgttggacagttttggtttttag
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integrated database retrieval system
