KEGG   Podospora pseudoanserina: QC764_308890
Entry
QC764_308890      CDS       T09816                                 
Name
(RefSeq) hypothetical protein
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
ppsa  Podospora pseudoanserina
Pathway
ppsa03022  Basal transcription factors
ppsa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    QC764_308890
  09124 Replication and repair
   03420 Nucleotide excision repair
    QC764_308890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppsa03021]
    QC764_308890
   03400 DNA repair and recombination proteins [BR:ppsa03400]
    QC764_308890
Transcription machinery [BR:ppsa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     QC764_308890
DNA repair and recombination proteins [BR:ppsa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     QC764_308890
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 DUF8512 zf-HIT
Other DBs
NCBI-GeneID: 87966864
NCBI-ProteinID: XP_062802046
UniProt: A0ABR0IFG0
LinkDB
Position
3:<3120471..3122358
AA seq 495 aa
MADSDDEYVGDLSGDDAGVDSVYGTRSKDGGKGKGGQKGKGTRKAAWEEVHRAWDEVAIA
EDGSITVAELIEAEKRRRLMRDTTPIQRGIIRHMVLVLDMSIAMAEKDLLPNRFALTFSY
AMEFVNTFFQQNPISQLGIIGMRDGIAVRISDMSGNPVEHIEKLRQWALKDPIGNPSLQN
ALEIHTPSHGTREVLIIYGALLSSDPGDISDTITSLIADRIRVSIIGLAAQVAICAELCA
RTNDNDDSQYRIALHEQHFRELFLAATTPPVTHEAEQSNASLLMMGFPSRSLASKDFVSL
CACHNKPTREGYTCTRCRIKVCRLPASCPVCGLTLILSIHLARSYHHLFPLKSWVAVPWT
EAKKSVACFSCQTPFPPVPKAAPPKIKLKVKESSGVGGQTAANIAKAKGRGEVPAKTNTV
TAPTPGLLPEAIKAGVSESGRYKCPECEEHFCIDCDIYAHETIHNCPGCLARLVKSQQQQ
QEEVVGAGEAMEVDS
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggccgactccgacgacgaatatgtcggggacctctctggtgacgatgccggagtcgac
agcgtctacggtacacgatcgaaagatggcggaaaaggaaaaggtggccagaagggcaag
ggaacccgcaaagcagcttgggaagaagtccaccgagcctgggacgaggttgccattgcc
gaagatggcagcatcacagtggccgagttgatcgaggccgagaaacgccggcggttgatg
cgggataccacaccgatccaacgtggaataatacggcacatggtgttggtgttggacatg
agcatcgcaatggcagagaaggacctgcttccgaaccgcttcgccctcaccttctcctac
gctatggaatttgtgaacacattctttcagcagaatccaatcagtcagctggggatcatc
gggatgcgcgatggtattgccgtcaggatcagcgacatgagtgggaacccagtcgagcac
attgagaagctgaggcagtgggcgcttaaggaccctattgggaacccaagtcttcaaaat
gccctcgaaatccacaccccctcccacggcacccgcgaagtcctcatcatatacggcgcc
ctcctctcctcggacccaggcgacatctccgacaccatcacctccctcatcgccgaccgc
atccgcgtctccatcatcggcctcgccgcccaggtagccatctgcgccgagctctgcgcc
cgcacaaacgacaacgacgactcccaataccgcatcgccctccacgagcagcactttcgc
gagctcttcctcgccgccacgacaccccccgtcacccacgaggcagagcaatcaaacgcc
tccctcctcatgatgggcttcccctcccgctccctcgcatcaaaagattttgtttccctc
tgcgcctgccacaacaaaccaacaagagaagggtacacctgcacgaggtgtagaatcaaa
gtctgccggttacccgcgtcttgtcccgtttgcgggctgacgctgatattgtcgattcac
ctggcgagatcgtatcaccacctttttcccctcaaatcatgggtggcggttccgtggaca
gaagcaaagaagtcggtggcgtgtttttcctgtcagacgcccttcccgcctgtcccgaag
gctgcgccgccaaagatcaagttgaaggtgaaggagtcttccggtgttggggggcagaca
gcagccaatatcgccaaggcaaaaggcagaggggaggtgcctgcaaagacgaatactgta
acggcaccgacgccagggttgttgccagaggcgatcaaggccggggtgagcgagagcggg
aggtataaatgtccagagtgtgaggagcatttttgcatcgattgcgatatttatgcccac
gagacgattcataactgtccggggtgtttggcgaggctggtgaagagtcagcagcaacaa
caggaggaagtagtaggggcaggggaggcgatggaggtggattcatga

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