Podospora pseudoanserina: QC764_308890
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Entry
QC764_308890 CDS
T09816
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03022
Basal transcription factors
ppsa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QC764_308890
09124 Replication and repair
03420 Nucleotide excision repair
QC764_308890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsa03021
]
QC764_308890
03400 DNA repair and recombination proteins [BR:
ppsa03400
]
QC764_308890
Transcription machinery [BR:
ppsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QC764_308890
DNA repair and recombination proteins [BR:
ppsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QC764_308890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
DUF8512
zf-HIT
Motif
Other DBs
NCBI-GeneID:
87966864
NCBI-ProteinID:
XP_062802046
UniProt:
A0ABR0IFG0
LinkDB
All DBs
Position
3:<3120471..3122358
Genome browser
AA seq
495 aa
AA seq
DB search
MADSDDEYVGDLSGDDAGVDSVYGTRSKDGGKGKGGQKGKGTRKAAWEEVHRAWDEVAIA
EDGSITVAELIEAEKRRRLMRDTTPIQRGIIRHMVLVLDMSIAMAEKDLLPNRFALTFSY
AMEFVNTFFQQNPISQLGIIGMRDGIAVRISDMSGNPVEHIEKLRQWALKDPIGNPSLQN
ALEIHTPSHGTREVLIIYGALLSSDPGDISDTITSLIADRIRVSIIGLAAQVAICAELCA
RTNDNDDSQYRIALHEQHFRELFLAATTPPVTHEAEQSNASLLMMGFPSRSLASKDFVSL
CACHNKPTREGYTCTRCRIKVCRLPASCPVCGLTLILSIHLARSYHHLFPLKSWVAVPWT
EAKKSVACFSCQTPFPPVPKAAPPKIKLKVKESSGVGGQTAANIAKAKGRGEVPAKTNTV
TAPTPGLLPEAIKAGVSESGRYKCPECEEHFCIDCDIYAHETIHNCPGCLARLVKSQQQQ
QEEVVGAGEAMEVDS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgactccgacgacgaatatgtcggggacctctctggtgacgatgccggagtcgac
agcgtctacggtacacgatcgaaagatggcggaaaaggaaaaggtggccagaagggcaag
ggaacccgcaaagcagcttgggaagaagtccaccgagcctgggacgaggttgccattgcc
gaagatggcagcatcacagtggccgagttgatcgaggccgagaaacgccggcggttgatg
cgggataccacaccgatccaacgtggaataatacggcacatggtgttggtgttggacatg
agcatcgcaatggcagagaaggacctgcttccgaaccgcttcgccctcaccttctcctac
gctatggaatttgtgaacacattctttcagcagaatccaatcagtcagctggggatcatc
gggatgcgcgatggtattgccgtcaggatcagcgacatgagtgggaacccagtcgagcac
attgagaagctgaggcagtgggcgcttaaggaccctattgggaacccaagtcttcaaaat
gccctcgaaatccacaccccctcccacggcacccgcgaagtcctcatcatatacggcgcc
ctcctctcctcggacccaggcgacatctccgacaccatcacctccctcatcgccgaccgc
atccgcgtctccatcatcggcctcgccgcccaggtagccatctgcgccgagctctgcgcc
cgcacaaacgacaacgacgactcccaataccgcatcgccctccacgagcagcactttcgc
gagctcttcctcgccgccacgacaccccccgtcacccacgaggcagagcaatcaaacgcc
tccctcctcatgatgggcttcccctcccgctccctcgcatcaaaagattttgtttccctc
tgcgcctgccacaacaaaccaacaagagaagggtacacctgcacgaggtgtagaatcaaa
gtctgccggttacccgcgtcttgtcccgtttgcgggctgacgctgatattgtcgattcac
ctggcgagatcgtatcaccacctttttcccctcaaatcatgggtggcggttccgtggaca
gaagcaaagaagtcggtggcgtgtttttcctgtcagacgcccttcccgcctgtcccgaag
gctgcgccgccaaagatcaagttgaaggtgaaggagtcttccggtgttggggggcagaca
gcagccaatatcgccaaggcaaaaggcagaggggaggtgcctgcaaagacgaatactgta
acggcaccgacgccagggttgttgccagaggcgatcaaggccggggtgagcgagagcggg
aggtataaatgtccagagtgtgaggagcatttttgcatcgattgcgatatttatgcccac
gagacgattcataactgtccggggtgtttggcgaggctggtgaagagtcagcagcaacaa
caggaggaagtagtaggggcaggggaggcgatggaggtggattcatga
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