Podospora pseudoanserina: QC764_309200
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Entry
QC764_309200 CDS
T09816
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC764_309200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_309200
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC764_309200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
87966896
NCBI-ProteinID:
XP_062802078
LinkDB
All DBs
Position
3:complement(3207939..3210263)
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AA seq
673 aa
AA seq
DB search
MAGATAAKVRVLPYKDFLQPALQRRFATSGLVILVVAYLEALLLASWDSFFWAWFPLGPA
GIRTFFFFLCGVLIITLRIAQHHPGVRTTSSPFATFLDSLRSFNTLETILTYAFSAWAFS
QVYLWCLSEDAGLEYISYYHADRARLNEKAVFLTTHCVLVGVWHGLRHLFSDVDRLHYGI
AKPPPQDADKMADKKANADDGDFNTQLQKLAQKLPEIVVFTLTQALTSTTATMITYSVFL
RGFVWRFTMSLFRPVYNLPKTNMTPMTLPFSLTIILRCLWTSVLLTFVWTLGNEAFSLFM
VKNPLKNNKPLTSESRDPNGSLLNGLKAKKLSIQCFAMWELAYIARDFPDRRKAIYEDID
RKNGPMWSQIYKICIDVLKQIETRIDNYEKYGKPTVPDPALDLNRNRAPEKKRLSETVPR
DEEVFQPSPQRRGYREAIERTVGKIATDPGQPSQLSPRARKIAEFAKEELIKAQKQATGT
DDTEGLAKDFATKFVESPFGWPFRQTYRRGVAKVLLGEPFGEVSLYANAAFALSGLAVRS
LQEDKYGYVQRDVAGLVRTLTGLVRKVEGFREGVVVSWTDVEGRRESREVEEILEGLRWS
LRGVVDGFGDYARDVGLSLGDLRLAREAAGVKKAVREEEEKEVKGRRLRLAGGETAAAGV
KITEEEVMGRRLR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgccacggctgcgaaagtgagggtgctgccgtacaaggatttcctccaaccc
gcgctgcagcggaggtttgcgacgagcgggttggtgatcttggtggttgcctacttggag
gccctgcttctggccagttgggattcatttttctgggcgtggttcccccttggcccagcc
ggcattcgaacattcttcttcttcctctgtggcgttctcatcatcacccttcggatcgct
caacaccaccccggtgtccgcaccacgagctctccctttgccaccttcctcgacagcctc
cggtccttcaacacgctcgagacgattctcacatatgcgttttcagcgtgggcctttagt
caagtctacctgtggtgtctgtctgaggacgcagggctggagtacatctcttactaccac
gccgatcgcgcgagattgaacgagaaggccgttttcttgaccacacactgcgtgttggtg
ggagtatggcacggtctcagacacctgtttagcgacgtcgaccggttgcactacggcatc
gcgaagcctccaccccaggacgcggacaagatggcggacaagaaggccaatgccgatgat
ggagactttaacacacagctccagaagctggcgcaaaagttgcccgagattgtcgtcttc
accttgacgcaggccttgacgtccaccacggccaccatgatcacgtactcggttttcttg
cgggggtttgtctggaggtttaccatgtcgctctttcggcccgtctacaacctccccaag
accaacatgacgcccatgacgcttccgttttcgttgaccatcatcctgcggtgcttgtgg
accagcgtgctgctcacgtttgtgtggacgcttggcaatgaagccttttcgctgttcatg
gtcaagaacccgcttaagaacaacaagccgctcacctcggagtcgagggaccccaacggc
agtcttctgaacgggttgaaggccaagaagctgtccattcagtgctttgccatgtgggaa
ctagcctacatcgcccgcgacttccccgaccgccgcaaggccatctacgaggacattgac
cgcaagaacgggcccatgtggtcccagatctacaagatctgcatcgacgtcctcaagcag
attgaaacaagaatcgacaactacgaaaagtacggcaaacccaccgtcccggatccggcg
ttggatctcaaccgaaacagggcccctgaaaagaaacgtctcagtgaaacggtccccaga
gacgaggaggtctttcagccttctccccagagaaggggctaccgggaggcgatcgagcgg
acggtggggaaaattgctaccgatccggggcagccgtcgcagcttagtccgcgggcgagg
aaaatcgccgagtttgccaaggaggagctgatcaaggcccagaagcaggccacggggacg
gacgacacggagggtttggccaaggactttgcgaccaagtttgtagagagcccgtttggt
tggccgtttagacagacgtaccgcagaggggtggcaaaggtgctgctgggggagccgttt
ggggaggtgagcctgtatgcgaacgctgcttttgcgcttagtgggctggcggtgaggagt
ttgcaggaggacaagtatgggtatgtgcagagggatgtggcggggttggtgaggaccttg
acagggttggtgaggaaggtggagggtttcagggagggggtggtggttagctggacggat
gtggaggggcggagggagtcgagggaggtggaggagatattggaggggttgaggtggagt
ttgaggggggtggtggatgggtttggggattatgctagggatgttgggttgagtttgggg
gatttgaggttggcgagggaggcggccggggtgaagaaggctgtcagggaggaggaggag
aaggaggtgaaggggaggcggttgaggttggctgggggggagacggcggcggcgggggtg
aagattacggaggaggaggtgatggggaggcggttgaggtag
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