KEGG   Podospora pseudoanserina: QC764_309200
Entry
QC764_309200      CDS       T09816                                 
Name
(RefSeq) hypothetical protein
  KO
K14315  nucleoporin NDC1
Organism
ppsa  Podospora pseudoanserina
Pathway
ppsa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ppsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    QC764_309200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsa03019]
    QC764_309200
Messenger RNA biogenesis [BR:ppsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     QC764_309200
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 87966896
NCBI-ProteinID: XP_062802078
LinkDB
Position
3:complement(3207939..3210263)
AA seq 673 aa
MAGATAAKVRVLPYKDFLQPALQRRFATSGLVILVVAYLEALLLASWDSFFWAWFPLGPA
GIRTFFFFLCGVLIITLRIAQHHPGVRTTSSPFATFLDSLRSFNTLETILTYAFSAWAFS
QVYLWCLSEDAGLEYISYYHADRARLNEKAVFLTTHCVLVGVWHGLRHLFSDVDRLHYGI
AKPPPQDADKMADKKANADDGDFNTQLQKLAQKLPEIVVFTLTQALTSTTATMITYSVFL
RGFVWRFTMSLFRPVYNLPKTNMTPMTLPFSLTIILRCLWTSVLLTFVWTLGNEAFSLFM
VKNPLKNNKPLTSESRDPNGSLLNGLKAKKLSIQCFAMWELAYIARDFPDRRKAIYEDID
RKNGPMWSQIYKICIDVLKQIETRIDNYEKYGKPTVPDPALDLNRNRAPEKKRLSETVPR
DEEVFQPSPQRRGYREAIERTVGKIATDPGQPSQLSPRARKIAEFAKEELIKAQKQATGT
DDTEGLAKDFATKFVESPFGWPFRQTYRRGVAKVLLGEPFGEVSLYANAAFALSGLAVRS
LQEDKYGYVQRDVAGLVRTLTGLVRKVEGFREGVVVSWTDVEGRRESREVEEILEGLRWS
LRGVVDGFGDYARDVGLSLGDLRLAREAAGVKKAVREEEEKEVKGRRLRLAGGETAAAGV
KITEEEVMGRRLR
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggcgggtgccacggctgcgaaagtgagggtgctgccgtacaaggatttcctccaaccc
gcgctgcagcggaggtttgcgacgagcgggttggtgatcttggtggttgcctacttggag
gccctgcttctggccagttgggattcatttttctgggcgtggttcccccttggcccagcc
ggcattcgaacattcttcttcttcctctgtggcgttctcatcatcacccttcggatcgct
caacaccaccccggtgtccgcaccacgagctctccctttgccaccttcctcgacagcctc
cggtccttcaacacgctcgagacgattctcacatatgcgttttcagcgtgggcctttagt
caagtctacctgtggtgtctgtctgaggacgcagggctggagtacatctcttactaccac
gccgatcgcgcgagattgaacgagaaggccgttttcttgaccacacactgcgtgttggtg
ggagtatggcacggtctcagacacctgtttagcgacgtcgaccggttgcactacggcatc
gcgaagcctccaccccaggacgcggacaagatggcggacaagaaggccaatgccgatgat
ggagactttaacacacagctccagaagctggcgcaaaagttgcccgagattgtcgtcttc
accttgacgcaggccttgacgtccaccacggccaccatgatcacgtactcggttttcttg
cgggggtttgtctggaggtttaccatgtcgctctttcggcccgtctacaacctccccaag
accaacatgacgcccatgacgcttccgttttcgttgaccatcatcctgcggtgcttgtgg
accagcgtgctgctcacgtttgtgtggacgcttggcaatgaagccttttcgctgttcatg
gtcaagaacccgcttaagaacaacaagccgctcacctcggagtcgagggaccccaacggc
agtcttctgaacgggttgaaggccaagaagctgtccattcagtgctttgccatgtgggaa
ctagcctacatcgcccgcgacttccccgaccgccgcaaggccatctacgaggacattgac
cgcaagaacgggcccatgtggtcccagatctacaagatctgcatcgacgtcctcaagcag
attgaaacaagaatcgacaactacgaaaagtacggcaaacccaccgtcccggatccggcg
ttggatctcaaccgaaacagggcccctgaaaagaaacgtctcagtgaaacggtccccaga
gacgaggaggtctttcagccttctccccagagaaggggctaccgggaggcgatcgagcgg
acggtggggaaaattgctaccgatccggggcagccgtcgcagcttagtccgcgggcgagg
aaaatcgccgagtttgccaaggaggagctgatcaaggcccagaagcaggccacggggacg
gacgacacggagggtttggccaaggactttgcgaccaagtttgtagagagcccgtttggt
tggccgtttagacagacgtaccgcagaggggtggcaaaggtgctgctgggggagccgttt
ggggaggtgagcctgtatgcgaacgctgcttttgcgcttagtgggctggcggtgaggagt
ttgcaggaggacaagtatgggtatgtgcagagggatgtggcggggttggtgaggaccttg
acagggttggtgaggaaggtggagggtttcagggagggggtggtggttagctggacggat
gtggaggggcggagggagtcgagggaggtggaggagatattggaggggttgaggtggagt
ttgaggggggtggtggatgggtttggggattatgctagggatgttgggttgagtttgggg
gatttgaggttggcgagggaggcggccggggtgaagaaggctgtcagggaggaggaggag
aaggaggtgaaggggaggcggttgaggttggctgggggggagacggcggcggcgggggtg
aagattacggaggaggaggtgatggggaggcggttgaggtag

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