KEGG   Podospora pseudoanserina: QC764_402660
Entry
QC764_402660      CDS       T09816                                 
Symbol
rrp4
Name
(RefSeq) Exosome complex component rrp4
  KO
K03679  exosome complex component RRP4
Organism
ppsa  Podospora pseudoanserina
Pathway
ppsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QC764_402660 (rrp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsa03019]
    QC764_402660 (rrp4)
Messenger RNA biogenesis [BR:ppsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     QC764_402660 (rrp4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     QC764_402660 (rrp4)
SSDB
Motif
Pfam: S1_RRP4 ECR1_N KH_6 RRP40_S1 CB_ParB_C ECR1_N_2 PCB_OB
Other DBs
NCBI-GeneID: 87967411
NCBI-ProteinID: XP_062800187
LinkDB
Position
4:complement(<1028103..>1029176)
AA seq 357 aa
MPITILPPKPSHPPPSPHDISDADSELSSDDGGGGAHLDFASLGLPSHQKSTHPPNNPLF
TNLVTPGTLITPDHQWMRGHGTYIPPSTTNITSSLAGITTRTNKLISVSPLRARYTPEVG
DLVVGRVLEVQAKRWRVDINSIQLASLPLSAINLPGGILRKRTETDELQIRTFFAEGDLV
VAEVQQLFQDGGAVLHTRSLKYGKLRNGLFVALSGQGGGSGVVRSRRQVWTMEGQNGGGK
MDVILGVNGYVWISKHIEQVAKELEQKHMGITNMEESVSAGVYSSQNDFIDSATMREIAR
LRNVVTALVENGCRVDEDMVIRGYAEACEMAMLGETGAEDIYLGGQRGEELTRALRN
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcccatcacaatcctcccccccaaaccctcccacccacccccttccccccacgacatc
tccgacgccgactccgagctctccagcgacgatggcggaggaggcgcccacctcgacttc
gcctccctcggcctcccctcccaccaaaaatccacccacccccccaacaaccccctcttc
accaacctcgtcacccccggcaccctcatcaccccagaccaccaatggatgcgcggccac
ggcacctacatcccccccagcaccacaaacatcacctcctccctcgccggcatcaccacc
cgcaccaacaagctcatctccgtctcccccctccgcgcccgctacacccccgaggtaggc
gacctagtagtaggccgcgtcctcgaagtccaagccaagcgctggcgcgtagacatcaac
tcgatccagctcgcctccctccccctctcagccatcaacctccccggcggcatcctccgc
aagcgcacagaaaccgacgagctccaaatccgcaccttcttcgccgagggcgacctcgtc
gtcgccgaagtgcagcagctcttccaggacggaggcgcagtcctccacacgcgctcgctc
aaatacggaaaactccgcaacgggctgtttgttgctctttctgggcagggcggcgggtcc
ggggtggtacggtcgaggagacaggtctggacgatggaggggcagaacggaggggggaag
atggatgttatactgggggtgaatggttacgtctggatcagcaagcatattgagcaggtg
gccaaggagctggagcagaagcatatggggattacgaatatggaggagagtgtcagcgcg
ggggtgtacagcagtcagaatgactttattgacagcgctaccatgagggagattgccaga
ctgaggaacgtcgtgacggcgttggtggagaatgggtgcagggtggatgaggatatggtg
atacgggggtatgccgaggcttgtgagatggccatgttgggggagacgggggcggaggat
atctatttgggtgggcagaggggggaggagttgacaagagcgttgaggaattga

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