Podospora pseudoanserina: QC764_403020
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Entry
QC764_403020 CDS
T09816
Symbol
NOT5
Name
(RefSeq) General negative regulator of transcription subunit 5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC764_403020 (NOT5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_403020 (NOT5)
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
QC764_403020 (NOT5)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
QC764_403020 (NOT5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
EAD9
WKF
Transcrip_reg
DUF7310
T4SS
CENP-Q
Nnf1
COG6_N
Motif
Other DBs
NCBI-GeneID:
87967445
NCBI-ProteinID:
XP_062800222
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All DBs
Position
4:1150243..1153148
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AA seq
647 aa
AA seq
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MAARKLQQEVDKCFKKVAEGVADFEAIYEKIEQSTNQAQKEKLEDQLKREIKKLQRLRDQ
IKTWAASNDIKDKGPLLEQRRLIETQMEKFKAVEKAMKTKAYSKEGLSAATKLDPKEQAK
LEASEFLSNMVDELEQQIETLEAEGESIQATMKKGKGQATKLERIAEIERIIERHKWHQG
KLELIRRSLENGGVETEQVTDLEESIKYYVSDGMNDDFPEDEGMYDDLNLEEEEDAFGMN
LENDKGSSQDTQSVQEEPAPEPETTRPAAAAPVGKQRTVADAVTGSATRRPSAQKSPLPT
LATVHNSQTTNSNGVQANVAMKPAALPTRPAEGLKYASAAAAAAASDKNNVGIAPLPPPP
GAPPASAASPLAPSQPRTSTTNSPSTAPIQPVVQDRAPLQTAQPPAKEAPKSAASKGKAP
VQPPTATPAASDHGDATPARAGSASTQGAPVSAPVPAANGVSNGIKPIEEEEEDEEEESI
YHLPAVLQDLVESYEVTKKRTASINSPLTQRMHITSEAAKPEVADAEPPRAYVPETKYLA
HTHFPQEPLDILDDPRLYERIEPDTLFYVFYYKQGTYQQYLAARALKDQSWRFHKQYQTW
FQRHEEPKSITEEFEQGTYRFFDYESTWMNRRKADFKFAYKFLEDEV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgaaagctgcagcaggaagtcgacaagtgcttcaagaaggtggctgaaggt
gtcgccgacttcgaggccatttacgagaagattgagcagtccaccaatcaggcgcaaaag
gagaagctagaagatcagctgaagcgagaaatcaagaagttgcagaggctgcgcgatcag
atcaagacatgggctgctagcaatgatatcaaggataaggggccgctgctggagcagcgg
aggctgatagagacgcaaatggagaagttcaaggctgtcgaaaaggcgatgaagacgaag
gcgtactctaaagaggggttatcagccgccaccaagctggaccccaaggagcaagcgaag
ctggaggcaagcgaattcctgagcaacatggttgacgaactcgagcagcaaatcgaaacc
ctcgaggccgaaggcgaatcgatacaagccaccatgaagaagggcaagggacaggcaacc
aagctggagcgcatcgccgagatagagcgcatcatcgaacggcataaatggcaccaaggg
aagctggagctgattcgccgctcactcgaaaatgggggcgtcgagaccgagcaagtcacg
gacctagaggagagcatcaagtactacgtgtccgacggcatgaacgacgatttccccgag
gacgagggcatgtatgacgatctaaacctggaagaagaggaggatgcctttggtatgaac
ctggagaacgacaagggctcatcacaggacacccagtcggttcaagaggagccagcccct
gagcccgagacgacaagaccggcagctgctgctccggtcggaaagcaacgcacggtggcc
gatgctgtgacagggtcggctacacgacgtccctcggcccaaaagtcacccctcccaacg
ctcgcaaccgtccacaactcgcaaacaaccaacagcaatggggtccaggccaatgttgcc
atgaagccggcagcgctaccaacccggcccgccgagggtttgaagtatgccagcgcagca
gcagccgctgccgcaagcgataagaacaacgtgggcattgcgcctttaccccctccgcca
ggtgctcctccagcatccgccgcctctccgttagcaccaagtcagccgaggacaagtact
accaactctcccagcacagcacccatacaaccggtggtgcaggacagggcacccctacaa
actgcccagccgccagccaaggaagcgcccaaatctgcagcatcaaagggcaaggctcct
gtacaaccgccaaccgccacaccagcagcttcagatcacggagatgccacccccgcgcga
gcaggttcggcgtcaacacaaggggctccagtatcagcaccagtaccggctgcgaacggc
gtttctaatggcatcaagccaatcgaggaggaagaggaagatgaagaggaagagtcgata
tatcatctccctgcggtcctccaagacctggtggaatcatacgaagtgaccaagaagcgg
acggcgtcaataaactcaccattgacccagaggatgcatatcacatcggaagcggctaag
cctgaagttgcggatgccgaaccaccccgcgcgtatgtgccggagacgaagtacctcgcg
cacacacacttcccacaagagccgctagatatcctggatgacccacgactgtacgaacga
atcgagccagacacactcttttacgttttctactacaaacaggggacataccagcaatat
cttgccgcgagggctttgaaggaccagagttggaggttccataaacaataccagacatgg
tttcagagacacgaagaaccaaagtcgattaccgaagagtttgaacaggggacgtaccgc
ttcttcgattatgagagcacatggatgaaccgcagaaaggcagattttaagtttgcctac
aagtttctcgaggatgaggtttga
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integrated database retrieval system
