Podospora pseudoanserina: QC764_404070
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Entry
QC764_404070 CDS
T09816
Symbol
TFB2
Name
(RefSeq) RNA polymerase II transcription factor B 52 kDa subunit
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03022
Basal transcription factors
ppsa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QC764_404070 (TFB2)
09124 Replication and repair
03420 Nucleotide excision repair
QC764_404070 (TFB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsa03021
]
QC764_404070 (TFB2)
03400 DNA repair and recombination proteins [BR:
ppsa03400
]
QC764_404070 (TFB2)
Transcription machinery [BR:
ppsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QC764_404070 (TFB2)
DNA repair and recombination proteins [BR:
ppsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QC764_404070 (TFB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
87967569
NCBI-ProteinID:
XP_062800281
LinkDB
All DBs
Position
4:1372716..1374933
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AA seq
513 aa
AA seq
DB search
MSSFGPSSFLLDDYLEKLPGATFRKLYQQPSTAFAIFRRMLPPLAKVYVQALLYSPTPLT
TNDIELWTQPEGKGTSNRAIARLRSLHIAQLSQSTRAKKAQDIQLTANFKKSLRLALEGG
GSHNSFGVPSTLPTDPKIHIQYLDHWAGRIWQDILYYVVNSVPMKANESGGRHGSGGGGP
KRAVRELLKMGGLVREGAGGLVQISEHGFNFLLQEANAQVWTLLLLWLEAADRNKALAKE
QGTDITGTAIDNVEMLSFLFMLASLELGRAYDTSALTETRKNMLPALADFGLIYIDRDRP
QQYYPTRLATTLTSLSTMRSVSASIDAATKKTPGDAGSLGADSTPTAPADENGGIVVETN
YRIYAYTSSPLQIAILKLFCRLHMRFPNMVTARLTRESVQEAIKEGITANQIIDYLVAHA
HPQMRRAAAAKGTTVIPPTVMDQIRLWQLESQRMQKTPGFQFKDFESVEEYRQLAEYATE
IGVLVWKDDRKGTFFVSKVEQIREFLKARKKGN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctttggcccctcgtccttcttgctcgacgattacttggagaagctgccaggc
gcaacgtttcgaaagctgtaccagcagccatccaccgcctttgctatctttcggcgcatg
cttccacctttagcaaaggtatatgttcaggccctgctgtacagtccgaccccccttacg
acaaatgatatcgagctctggacgcaaccagaaggcaaaggcacgagcaatagagcgatc
gcgaggctgcgctcactacatatcgcccagttatcacagtcgaccagggccaagaaagca
caagatattcaactcacagccaacttcaaaaaatctctacgactcgccctcgagggcggc
ggatcacacaacagcttcggcgtacccagcacattacctaccgacccaaagatacacatc
caatatctcgaccactgggccgggagaatatggcaagacatcctttactacgtcgtcaac
agcgtccccatgaaagccaacgaatccggcggccgacacggctccggaggcggcggtcca
aaacgagcagtccgcgaactcctcaaaatgggcggtctcgtgcgcgaaggcgccggcggt
ctcgtccaaatcagcgagcatggcttcaacttcctcctccaagaagccaacgcccaagtc
tggaccctcctcctcctctggctcgaagccgccgaccgcaacaaagccctcgccaaagag
caaggcaccgacataacaggaacagccatcgacaatgtcgagatgctctcctttctcttc
atgctcgcctccctcgagctcggccgcgcatacgacacttctgctttgaccgaaacccga
aagaacatgctccccgcgctggctgactttggcctgatatacatcgaccgtgacagacca
cagcaatactacccaacccgattagccaccactcttacctccttatcaaccatgaggtca
gtatcagccagcatcgatgccgccacgaagaaaacccccggtgacgcgggcagtctggga
gcagactccaccccaacagcaccggcggatgaaaacggcgggattgtagttgaaacaaac
tatcgtatctatgcttacacttcctcccctttgcaaatcgccatcctcaagctgttctgc
cggctacacatgcggtttccaaacatggtcaccgccagattgacgagagaatcagtccag
gaagccatcaaggaagggatcacggcgaaccaaatcattgactaccttgtcgcgcatgca
cacccacaaatgaggcgcgccgccgcggcgaagggcacaaccgtaatcccgccgacggtg
atggatcagatccgactgtggcagctggagagtcagaggatgcaaaagacgccagggttc
caattcaaagacttcgagagcgtggaggagtacaggcagctggcggagtacgcgaccgag
ataggggtcttggtttggaaggatgatcggaagggcacgtttttcgtcagcaaggtggag
cagattcgtgaattcttgaaggcaaggaagaaggggaattag
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