Podospora pseudoanserina: QC764_404960
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Entry
QC764_404960 CDS
T09816
Symbol
HFM1
Name
(RefSeq) ATP-dependent DNA helicase MER3
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsa03036
]
QC764_404960 (HFM1)
Enzymes [BR:
ppsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QC764_404960 (HFM1)
Chromosome and associated proteins [BR:
ppsa03036
]
Eukaryotic type
Meiosis-specific proteins
Others
QC764_404960 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Sec63
ResIII
SNRNP200_wHTH
Helicase_C
HHH_5
UvrD-helicase
AAA_30
AAA_22
T2SSE
AAA_19
Cdd1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
87967655
NCBI-ProteinID:
XP_062800956
LinkDB
All DBs
Position
4:complement(3586648..3591730)
Genome browser
AA seq
1529 aa
AA seq
DB search
MPGQPSSSPSYRLILGHPASAFYSPSPAANASQHVLQFFLPLSYLPPGHFNTLRNWHTMS
RPWRPNRPHVAKRNRVVPVPDDSVRSQDASRDTRHSHNHRCASEMDPRTPDQFRYLNQPT
QFDDRLGDAYAIEQDPEYQQIIAGLSRHSAPHMTERHASPPYQNANTPGSFQSQHHPAHN
ISQPRHHLSQRQPLASYSVSPVLEPSARSWSHANYSPPPGSTTHTQPYHTSFATTTATQP
DITHFQPLPTPSTTREHVPSQRQGTAPVVRGIRLVNLREALPDKFRALFPFEFFNAVQSK
CFEAVYKTNNNVVVSAPTGSGKTAILELAICKLALDRGHENFKIVYQAPTKALCAEKARD
WEKKFGHMKLKCAELTGDTSQAEMRRVGDASIIVTTPEKWDSITRKWQDHRRLLQLVELF
LIDEVHILKDVRGATLEAVVSRMKTIGTNVRFIALSATVPNSDDIAQWLGRDHTNQHLPA
LRETFGEEFRPVKLQKFVYGYECNGNEFILDKLLDSKLPNLIARHSQQKPILVFCFTRKS
CESTASLLAEYAAARPNAKLWPAPKGRIPVISRELQELVKLGVAFHHAGLDVQDRGAVEQ
SFLKGELGVICCTSTLAVGINLPCHTVVLKGTMGYADDKLQECSDLEVMQMLGRAGRPQF
DDSATAIILTKAGNKARYEKMVSGQEILESTLHLNLIEHLNSEIGLGTIHDLASAKKWLS
GTFLSVRLRRNPSFYHLTGSNCNPSQIDAKLEEICERDIKQLQEAQCVTDNETFKSTYYG
RAMSKYMVEFSTMKMLLQIPKAVKMGALLTILSQASEFKEFRFKPAERPLFREMNQSPLI
VYPIKEAVTQTWHKISLMVQAHLGSVQYPDSADAAKARRQLVLERKIVFERLNRLVHAVI
DCKGNDYDAIGMKNALELARALAAESWEGRVTQLTQVPSIGPVGMRKLASKGIRTVLELA
DMDSVDIERLMARQTPFGMTIKSSLEKFPRLSFDLELVSHKSQPRPTGATVGVEIRANLR
YLNRLGPPYWKKKTPDINFLAETTSGTLSFFWRGSMRKLEVSKETGYELKFWVGLQNVDD
DIVCHFTCEEIVGTMISKTLKHNIPASAFPKQAAFSTVPLSWAPPATAKFTQPRTIDGSN
DADQMDELDDGGIDDSDFILAAEQAAARLALRPQSSFTTQSIQAPRFMMEGQKDAQADQY
PGIHELVEMAQEEGSSQPESDTSPPVQLPSGKWQCNHNCAGGTLTKTGKPCTHRCCKEGL
DKPRKRAPPKPKVKRTAEEAWDGSKTSPQAAGDRKRPKIESVSRPGATQQAPGVRPPVRS
AAVDWNAYGFTEEDLECIDLSSYTDDEGDSATIKAEQNVITKSKPQRANEVRTAAQPPRH
SETDDEADLPSLDELCAANTSVIRKTPGAAWPRFQMPFTNPTAFRPGASDVVLFEGIAKK
FEISNTCKDLNSDEGDTPYPSSSPMFVYQESPASSNMSTNETMAVTRENQMKEEVQSGRT
SWPDGLPDWVKVDSNREIVDFFGPCVTYV
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggcagcccagttcatctccatcttatcgtttgatactcgggcatcccgcatcc
gcattctacagcccaagtccagctgcaaacgcctctcaacacgtgttgcaattctttctg
cctctgtcataccttccacccgggcacttcaataccttacgcaattggcacaccatgtcg
cggccatggaggcccaacagaccccatgttgcgaaacgcaatcgtgttgtgccagtacct
gacgacagtgtacgttcccaggacgcttcccgagacacccgtcattcacacaaccaccgc
tgcgcctcggagatggatccccggaccccggaccagttccgctacttgaaccagccgacg
caatttgatgatcgactgggagacgcctacgccattgaacaagaccccgaataccaacaa
atcattgccggtttatcgagacactccgccccacacatgacagagagacatgctagtcct
ccataccaaaacgcaaacactcctggctcctttcaatcgcaacaccacccagcccacaac
atctcgcagcctcgccaccacctatcgcaacgacaaccattggcttcatattcagtctct
cccgtcctcgagccttccgcccgcagttggtcgcatgcgaactacagcccgccccccggg
tcaactacccacacgcaaccgtatcacacgtcgtttgcaactacaacagctacccaaccg
gacattacacactttcaaccccttccaactcccagtactacgcgagagcacgttccctct
caacggcagggtactgcgcctgttgttcgcggtatacgcctcgtcaacttacgagaggcc
ctgccagacaagttccgcgccctgttcccctttgaatttttcaacgcagtacagtccaag
tgcttcgaggcagtgtacaagaccaacaacaatgtggtggtctcggcacccaccggtagt
ggaaagactgccatcctcgagttggcaatttgcaaacttgctctcgatcgcggccacgaa
aacttcaagattgtgtaccaagcacccaccaaggccttgtgtgccgaaaaggctcgcgat
tgggaaaagaagtttggccacatgaagctcaagtgcgctgagctcaccggggacacttcc
caagccgagatgcggcgcgtcggcgatgcttcgatcattgttaccaccccagagaagtgg
gattcgattacacgaaaatggcaagaccatcgcaggcttctgcagctggtcgagctattc
ctcatcgacgaggttcatattctcaaggatgtccgtggcgccacgttggaagcagtcgtt
tcccgcatgaagaccattggaaccaatgttcgatttatcgctctgagcgccaccgttccc
aactcggatgatattgcccaatggcttggccgggaccataccaaccagcacctgccggca
ctgcgagagacatttggtgaagagttcaggcctgtcaaactgcaaaagttcgtttatgga
tacgagtgcaacggcaacgagttcatccttgataagctgcttgactccaaactccccaac
ctaattgccaggcactctcaacagaagcccatactggtgttttgcttcacacggaaatcc
tgcgagtcaacggccagtctgctggccgaatatgctgctgccaggccaaatgcgaagctg
tggcctgcccccaaaggccggatccccgtcatcagccgagagctgcaggagcttgtcaaa
ttgggtgtagcattccaccatgctggtctcgacgttcaagatcgaggtgctgttgagcag
tcatttcttaagggagaactaggtgtcatatgttgcacgtcgacattggccgttggcatt
aacctgccatgccacacagttgtgttgaaaggaacaatgggctacgcggatgacaagctt
caggagtgctctgatctcgaggtgatgcaaatgctaggtcgagcgggacgcccccaattt
gatgacagcgccactgccatcatcctgaccaaggccggcaacaaggcacggtacgaaaag
atggtgtccggacaagaaatcctcgagagcacgcttcatctcaacctgatcgaacacctc
aactccgagataggcttgggcaccatccacgatctcgcgtctgcaaagaagtggcttagc
ggcacgttcttgagcgtccggcttcgacgcaacccaagcttttaccacttgactggcagt
aattgcaatcccagccagatcgacgccaagctggaagagatatgcgagcgcgacattaag
caactgcaagaggcccagtgtgttactgacaacgagacattcaaatcaacctactacggc
cgcgccatgtccaagtatatggttgagttttccacaatgaagatgctgttgcagattccc
aaggctgtcaagatgggcgcactgctcaccatcctttcacaagccagcgagttcaaagag
tttcgtttcaagcccgccgagaggcctttgtttcgcgagatgaaccagtcccccctcatc
gtctatccaatcaaggaagcggtcacgcaaacatggcacaagatctccttgatggttcag
gcccatttgggaagcgttcaataccccgactcggccgatgcagccaaggctcgacgtcaa
ctggtcttggagcgcaaaatcgtgtttgagcgactcaaccgccttgtccacgccgtgatt
gactgcaaaggaaacgactatgatgcgattggcatgaagaatgccctcgagcttgcgaga
gccctcgctgcagagtcatgggaaggtcgggtgacacaactgacccaggtacccagcatt
gggcccgttgggatgcgtaagcttgccagcaaaggcatccggacagtgttggaactcgcc
gacatggacagcgtcgacattgagagattgatggctcggcagacccccttcggaatgact
atcaagagctctcttgaaaagtttccccggttgagcttcgatctggagctagtcagccat
aagtctcaacctaggccaacaggcgccaccgttggggtggaaattagggctaacctacgg
tatttgaatcgactcggtccaccttattggaagaagaagacacctgacatcaacttcctg
gccgaaactaccagcgggactctttcgttcttttggcgaggcagcatgaggaagctggag
gtcagcaaagagacagggtacgagttgaagttctgggttggtctccaaaatgttgatgac
gacattgtgtgtcactttacttgcgaggagattgttgggacgatgatatccaagacactg
aaacacaacattcctgcctcagcatttcccaagcaagccgctttctccaccgtgcccttg
agctgggctccgccagcgacagccaagttcactcaaccacggacgattgatggcagcaat
gatgctgatcaaatggacgagctggacgatggtggtattgacgattctgacttcattctc
gccgctgagcaggcggccgctcggttagcactgcgcccacagtcatcattcaccacgcaa
tctatccaagcacccaggtttatgatggagggccaaaaagacgctcaggcggatcagtat
ccaggaatccatgagttggtcgagatggcacaggaagagggttcctctcaacccgagtcc
gatacatcccccccagtccagcttccaagcggaaagtggcagtgtaatcataactgtgcg
ggtgggactctcacaaagacgggcaagccatgcactcatagatgttgcaaagagggactt
gacaagccacgaaagcgggcaccgcccaaaccaaaggtcaagcgcacggccgaggaggcc
tgggatggttctaagacttcccctcaagctgcgggcgataggaagcggcccaagattgag
tcggtatcacggcccggtgccactcaacaggcaccaggcgtccgcccgcctgttcggtct
gccgcagtagactggaatgcgtacgggttcacagaggaggatctggagtgtatcgatctt
tcatcctataccgacgatgaaggcgattccgctaccatcaaggcggagcagaatgtaata
acaaagtccaagccccaacgagcaaatgaagtccgtacagccgcacaacctcctcgccat
tcagagacagacgatgaggccgacttgcccagtctggacgagctttgtgcagcgaacact
tcagtcatacggaaaacgcccggtgcggcctggccgcggtttcaaatgcctttcacaaat
ccaacggccttcagacctggcgcctctgacgtggtgttgtttgaaggcattgccaaaaag
tttgaaatttcaaacacctgcaaggacttgaactctgatgagggtgatacaccctaccct
agcagttcgccaatgtttgtgtaccaagaatcgccagcaagctcgaacatgtcgacgaac
gaaactatggcggtcactcgcgaaaatcaaatgaaggaggaggttcagtctggcaggacc
tcgtggccggacggcttgcccgactgggtgaaggtcgactccaatagggagattgtggat
ttctttgggccgtgtgtaacatatgtatga
DBGET
integrated database retrieval system
