Podospora pseudoanserina: QC764_409240
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Entry
QC764_409240 CDS
T09816
Symbol
PAB1
Name
(RefSeq) Protein phosphatase PP2A regulatory subunit B
KO
K13126
polyadenylate-binding protein
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03015
mRNA surveillance pathway
ppsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
QC764_409240 (PAB1)
09123 Folding, sorting and degradation
03018 RNA degradation
QC764_409240 (PAB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_409240 (PAB1)
03041 Spliceosome [BR:
ppsa03041
]
QC764_409240 (PAB1)
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
QC764_409240 (PAB1)
mRNA cycle factors
Stress granule specific factors
QC764_409240 (PAB1)
Spliceosome [BR:
ppsa03041
]
Complex C
Other components
Complex C specific factors
QC764_409240 (PAB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_5
RRM_10
RRM_occluded
RRM_MUD2_C
RBD_DEAH11
RRM_RdRP1_2
PABC_AtC3H46
YflT
PHM7_cyt
BRAP2
Motif
Other DBs
NCBI-GeneID:
87968072
NCBI-ProteinID:
XP_062800461
UniProt:
A0ABR0IA32
LinkDB
All DBs
Position
4:complement(1971797..1975792)
Genome browser
AA seq
804 aa
AA seq
DB search
MIVHPPPPSPATPPLAPPPPNTRTTNSPQRHSSHRSLTVSTHLLDPAIIMAAPVASGAVD
QLAADLGNTSLNGGENRNAPAIDTNVAAGQFQNEDQEGAGPTPNSAAPHPQSSASLYVGE
LDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNATADGEKALEDLNYTLI
KGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN
SKGYGFVHYETDEAAANAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNVYVK
NIPAEVTDEEFRELFAKYGDVTSSSLARSDEGKSRGFGFVNFTTHEAASKAVEELNGKDF
RGQELYVGRAQKKHEREEELRRSYEAARQEKANKYQGVNLYIKNLGDDVDDDKLRQMFSE
YGPITSAKVMRDSVVESAAEDEKDKENKKEGEEEKEGETAEKKAESKEKRKLGKSKGFGF
VCFSNPDDATKAVTEMNQRMIDNKPLYVALAQRKDVRKSQLEASIQARNQLRMQQAAAQA
GIPQQFMQQPVYYAPGQQPGFMPPAGGRGMPFAQGAMGIPPQGGRPGQYPPYAGQQGGRG
GMPPQQMPIYPMGAFPPNFAQPNNPQFLAAMQQIQAAAIQGGRGGPGPRGVQGMPPQIPG
GPVAGFPPNGRSQNGMGRGAGGNRGGFAGGRGGAPSAGPADVNIAAVLHTQLAAAASPAQ
QKQILGESLFPKIQAIQPELAGKITGMLLEMENQELINLIEDEAALNAKVGEAMNVYDEY
VKTQATGEAKGEEPKAEEKAEEKA
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtccacccaccaccaccatcgccagcgacccctccgctggcacccccaccaccc
aacacgcgaacaacaaattctccacaaagacacagctcccacagatcactgaccgtgtcc
actcatcttctagacccagctatcataatggccgctcccgttgcctctggcgctgtcgac
cagcttgccgctgatctcggcaacactagcctcaacggcggtgagaaccgcaatgccccc
gccatcgataccaacgtggctgctggccagttccagaacgaggaccaggagggcgccggc
cctacccccaactcggccgctcctcacccccagtcctcggcctccctctacgtcggcgag
ctggacccgtctgtgactgaggccatgctcttcgagctcttctcccagatcggctccgtt
gcctcgattcgtgtctgccgcgacgccgtcactcgtcgctctctcggctatgcctatgtg
aactacaatgccactgccgacggcgagaaggccctcgaggacctcaactacactctcatc
aagggccgcccctgccgcatcatgtggtctcagcgtgaccctgctctgcgcaagactggc
cagggcaacgtctttattaagaaccttgatgtcgccatcgacaacaaggcgcttcacgac
accttcgctgctttcggtaacatcctgagctgcaaggtcgcccaggacgagaacggcaac
tccaagggttacggtttcgttcactacgagaccgacgaggctgccgccaacgccatcaag
catgtcaacggcatgcttctcaacgagaagaaggtctatgtcggctaccacatccccaag
aaggatcgccagagcaagtttgaggagatgaaggccaacttcaccaacgtctacgtcaag
aacatccccgccgaggtcaccgacgaggagttccgtgagctcttcgccaagtacggcgat
gtcacctcctcctcccttgcccgctctgacgaaggcaagagccgtggctttggctttgtc
aacttcactactcacgaagctgcttccaaggctgttgaggagctcaacggcaaggatttc
cgtggtcaggagctgtatgtcggccgtgcccagaagaagcacgagcgcgaggaggagctc
cgcaggtcttatgaggctgctcgccaggagaaggctaacaaataccaaggcgtcaacctc
tacatcaagaacctcggagatgatgttgatgatgacaagctccgccagatgttctccgag
tacggccccatcacctcagccaaggtcatgcgcgacagcgtagttgagtccgccgctgag
gatgagaaggacaaggagaacaagaaggagggcgaggaggagaaggagggcgaaaccgcc
gagaagaaggccgagtccaaggagaagcgcaagctcggcaagagcaagggcttcggtttc
gtctgcttcagcaaccccgacgatgccaccaaggccgtcaccgagatgaaccagcgcatg
attgacaacaagcccctctacgtcgctctcgctcagcgcaaggatgttcgcaagagccag
ctcgaggccagcatccaagcccgcaaccagctccgcatgcagcaggctgccgcccaggct
ggtattcctcagcagtttatgcaacagccagtttactatgctcccgggcagcagcctggc
tttatgccccccgccggcggccgcggcatgcccttcgctcagggagctatgggcatccct
ccccagggtggtcgtcccggccagtaccctccctacgctggtcagcagggcggccgtggc
ggcatgcctccccagcagatgcccatctaccccatgggtgctttccctcccaactttgcc
cagcccaataaccctcagttccttgctgccatgcagcagatccaggctgctgctatccaa
ggtggccgtggcggtcctggccctcgtggcgtgcagggcatgcctcctcagatccccggt
ggccccgtcgccggcttccctcccaacggcagatcccagaacggcatgggccgtggtgcc
ggcggcaaccgcggtggctttgccggcggccgtggcggtgctccctccgctggtcccgcc
gatgtgaacatcgccgctgttctccacacccagctcgccgctgccgcttctcctgcccag
cagaagcagatcctcggcgagagcctcttccccaagatccaggccatccagcccgagctc
gctggcaaaatcaccggcatgctcttggagatggagaaccaggagctcatcaacctcatc
gaggatgaggctgctctcaacgccaaggtcggcgaggccatgaacgtctatgacgagtac
gtcaagactcaagccactggcgaggccaagggtgaggagcccaaggccgaggagaaggcc
gaggagaaggcttag
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integrated database retrieval system
